Gm8874 Pseudogene Detail

Summary

• Symbol
  Gm8874
• Name
  predicted gene 8874

• Feature Type
  pseudogene
• IDs
  MGI:3645640
  NCBI Gene: 667907
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr5:11100427-11100712 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, 3.81 cM
• Mapping Data
  1 experiment

Strain
Comparison

• Strain Annotations
  25

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3645640	pseudogene	Chr5:11099660-11100712 (+)
129S1/SvImJ	ENSMUSG00200002891	pseudogene	Chr5:7902755-7903033 (-)
A/J	ENSMUSG00195012592	pseudogene	Chr5:7714418-7714697 (+)
AKR/J	ENSMUSG00220002231	pseudogene	Chr5:7745647-7745926 (+)
BALB/cJ	ENSMUSG00180018624	pseudogene	Chr5:7561112-7561397 (+)
C3H/HeJ	no annotation
C57BL/6NJ	ENSMUSG00215029807	pseudogene	Chr5:7202837-7203116 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005001899	pseudogene	Chr5:7725867-7726146 (+)
CBA/J	ENSMUSG00210002956	pseudogene	Chr5:8175034-8175313 (-)
DBA/2J	ENSMUSG00185029991	pseudogene	Chr5:8104666-8104951 (+)
DBA/2J	ENSMUSG00185030009	pseudogene	Chr5:8659521-8659806 (+)
FVB/NJ	no annotation
JF1/MsJ	ENSUMUG00000004131	pseudogene	Chr5:8368773-8369052 (+)
JF1/MsJ	ENSUMUG00000004092	pseudogene	Chr5:8282137-8282416 (-)
JF1/MsJ	ENSUMUG00000004112	pseudogene	Chr5:9271747-9272026 (-)
JF1/MsJ	ENSUMUG00000004151	pseudogene	Chr5:9069132-9069411 (+)
JF1/MsJ	ENSUMUG00000004105	pseudogene	Chr5:8650341-8650620 (-)
JF1/MsJ	ENSUMUG00000004099	pseudogene	Chr5:8425813-8426092 (-)
JF1/MsJ	ENSUMUG00000004143	pseudogene	Chr5:8737458-8737735 (+)
JF1/MsJ	ENSUMUG00000004122	pseudogene	Chr5:8011470-8011749 (+)
LP/J	ENSMUSG00230003458	pseudogene	Chr5:12111939-12112224 (+)
NOD/ShiLtJ	ENSMUSG00190013073	pseudogene	Chr5:7449852-7450131 (+)
NZO/HlLtJ	ENSMUSG00225008918	pseudogene	Chr5:15787395-15787680 (+)
NZO/HlLtJ	ENSMUSG00225008925	pseudogene	Chr5:16342152-16342437 (+)
PWK/PhJ	ENSLUMG00010019966	pseudogene	Chr5:7984678-7984957 (-)
SPRET/EiJ	ENSMSPG00010005248	pseudogene	Chr5:7953630-7953908 (+)
WSB/EiJ	ENSIUOG00005027335	pseudogene	Chr5:7687816-7688095 (-)

Homology

• Gene Tree
  Gm8874
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  30
• RefSeq
  2

• Ensembl
  ENSMUSG00000106477 (Evidence)
• NCBI Gene
  667907

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000106477	Ensembl Gene Model | MGI Sequence Detail	286	C57BL/6J
transcript	ENSMUST00000196826	Ensembl | MGI Sequence Detail	286	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;