Gm8873 Pseudogene Detail

Summary

• Symbol
  Gm8873
• Name
  predicted gene 8873

• Feature Type
  pseudogene
• IDs
  MGI:3645638
  NCBI Gene: 667904
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:110992258-110993394 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, 58.22 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  160 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3645638	pseudogene	Chr10:110992077-110993515 (+)
129S1/SvImJ	ENSMUSG00200011420	pseudogene	Chr10:107409639-107411079 (+)
A/J	ENSMUSG00195008469	pseudogene	Chr10:107825042-107826482 (+)
AKR/J	ENSMUSG00220025005	pseudogene	Chr10:107406190-107407628 (+)
BALB/cJ	ENSMUSG00180025175	pseudogene	Chr10:107844539-107845979 (+)
C3H/HeJ	ENSMUSG00175016107	pseudogene	Chr10:107772970-107774410 (+)
C57BL/6NJ	ENSMUSG00215012528	pseudogene	Chr10:107495887-107497327 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005011676	pseudogene	Chr10:106869389-106870803 (+)
CBA/J	ENSMUSG00210011695	pseudogene	Chr10:107644364-107645802 (+)
DBA/2J	ENSMUSG00185024716	pseudogene	Chr10:107768293-107769748 (+)
FVB/NJ	ENSMUSG00205011627	pseudogene	Chr10:107267711-107269149 (+)
JF1/MsJ	ENSUMUG00000010283	pseudogene	Chr10:109089361-109090784 (+)
LP/J	ENSMUSG00230012905	pseudogene	Chr10:109718931-109720369 (+)
NOD/ShiLtJ	ENSMUSG00190020666	pseudogene	Chr10:107872012-107873450 (+)
NZO/HlLtJ	ENSMUSG00225017593	pseudogene	Chr10:113973227-113974665 (+)
PWK/PhJ	ENSLUMG00010014013	pseudogene	Chr10:107468835-107470269 (+)
SPRET/EiJ	ENSMSPG00010005654	pseudogene	Chr10:109293044-109294443 (+)
WSB/EiJ	ENSIUOG00005010853	pseudogene	Chr10:107542283-107543750 (+)

Homology

• Gene Tree
  Gm8873
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  7 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Gene trapped
  1
• Genomic Mutations
  1 involving Gm8873
• Find Mice (IMSR)
  1 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000111968 (Evidence)
• NCBI Gene
  667904

Representative Sequences			Length	Strain/Species
genomic	667904	NCBI Gene Model | MGI Sequence Detail	1137	C57BL/6J

References

• Summaries
  All 11

  Phenotypes 7
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
• Latest
  J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9