Gm8016 Gene Detail

Summary

• Symbol
  Gm8016
• Name
  predicted gene 8016

• Feature Type
  lncRNA gene
• IDs
  MGI:3645625
  NCBI Gene: 666272
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:68501483-68504944 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, 35.35 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  28 from dbSNP Build 142
• Strain Annotations
  12

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3645625	lncRNA gene	Chr13:68501483-68504944 (-)
129S1/SvImJ	no annotation
A/J	ENSMUSG00195032074	lncRNA gene	Chr13:63598507-63601962 (+)
AKR/J	ENSMUSG00220041761	lncRNA gene	Chr13:62164310-62167763 (+)
BALB/cJ	ENSMUSG00180030023	lncRNA gene	Chr13:64078547-64082004 (+)
C3H/HeJ	ENSMUSG00175009163	lncRNA gene	Chr13:64382394-64385850 (+)
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005012203	lncRNA gene	Chr13:63672677-63712414 (+)
CBA/J	ENSMUSG00210009966	lncRNA gene	Chr13:63705283-63708738 (+)
DBA/2J	no annotation
FVB/NJ	no annotation
JF1/MsJ	ENSUMUG00000035525	lncRNA gene	Chr13:67021888-67025349 (-)
LP/J	ENSMUSG00230034170	lncRNA gene	Chr13:77301614-77305074 (+)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010012018	lncRNA gene	Chr13:63079696-63083157 (-)
SPRET/EiJ	ENSMSPG00010034874	lncRNA gene	Chr13:63975950-63979412 (-)
WSB/EiJ	ENSIUOG00005024558	lncRNA gene	Chr13:62387337-62406427 (+)

Homology

• Gene Tree
  Gm8016
  

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  17
• RefSeq
  1

• Ensembl
  ENSMUSG00000113050 (Evidence)
• NCBI Gene
  666272

Representative Sequences			Length	Strain/Species
genomic	666272	NCBI Gene Model | MGI Sequence Detail	3462	C57BL/6J
transcript	NR_152173	RefSeq | MGI Sequence Detail	1575	C57BL/6

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;