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Gm5316 Pseudogene Detail
Summary
  • Symbol
    Gm5316
  • Name
    predicted gene 5316
Location &
Maps
more
  • Sequence Map
    Chr6:122877095-122877364 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
  • Genetic Map
    Chromosome 6, 57.99 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    10 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3645576
pseudogene Chr6:122876970-122877364 (-)
129S1/SvImJ MGP_129S1SvImJ_G0039742
pseudogene Chr6:126025065-126028160 (-)
A/J MGP_AJ_G0039742
pseudogene Chr6:121249408-121252503 (-)
AKR/J MGP_AKRJ_G0039667
pseudogene Chr6:124607167-124610262 (-)
BALB/cJ MGP_BALBcJ_G0039711
pseudogene Chr6:120961279-120964374 (-)
C3H/HeJ MGP_C3HHeJ_G0039373
pseudogene Chr6:124571597-124574692 (-)
C57BL/6NJ MGP_C57BL6NJ_G0040273
pseudogene Chr6:129354658-129357753 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0036930
pseudogene ChrX:147864222-147864475 (-)
CAST/EiJ MGP_CASTEiJ_G0038491
pseudogene Chr6:124836322-124839417 (-)
CBA/J MGP_CBAJ_G0039345
pseudogene Chr6:134389529-134392624 (-)
DBA/2J MGP_DBA2J_G0039538
pseudogene Chr6:120180444-120183539 (-)
FVB/NJ MGP_FVBNJ_G0039496
pseudogene Chr6:119112259-119115354 (-)
LP/J MGP_LPJ_G0039577
pseudogene Chr6:126217177-126220272 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0039498
pseudogene Chr6:138350086-138353181 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0040374
pseudogene Chr6:124493590-124496685 (-)
PWK/PhJ MGP_PWKPhJ_G0038166
pseudogene Chr6:119020879-119023974 (-)
SPRET/EiJ MGP_SPRETEiJ_G0037914
pseudogene Chr6:122640604-122643714 (-)
WSB/EiJ MGP_WSBEiJ_G0038725
pseudogene Chr6:124809442-124812538 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000049249 Ensembl Gene Model | MGI Sequence Detail 270 C57BL/6J ±  kb
transcript ENSMUST00000050391 Ensembl | MGI Sequence Detail 270 Not Applicable  
polypeptide XP_036008361 RefSeq | MGI Sequence Detail 89 C57BL/6J  
For the selected sequence
Molecular
Reagents
less

  • Microarray probesets 1
References
more
  • Summaries
    All 5
  • Earliest
    J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
  • Latest
    J:144086 Mouse Genome Informatics Scientific Curators, Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform. Database Download. 2009;

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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last database update
05/28/2024
MGI 6.13
The Jackson Laboratory