Gm8110 Gene Detail

Summary

• Symbol
  Gm8110
• Name
  predicted gene 8110

• Feature Type
  lncRNA gene
  BioType Conflict
  
• IDs
  MGI:3645532
  NCBI Gene: 666446
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr8:29011012-29011863 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, 16.43 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  173 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3645532	lncRNA gene	Chr8:29010704-29029103 (+)
129S1/SvImJ	ENSMUSG00200022552	lncRNA gene	Chr8:24083490-24092029 (+)
A/J	ENSMUSG00195005954	lncRNA gene	Chr8:24616456-24624995 (+)
AKR/J	ENSMUSG00220026396	lncRNA gene	Chr8:24344216-24352762 (+)
BALB/cJ	ENSMUSG00180005788	lncRNA gene	Chr8:24140998-24149541 (+)
C3H/HeJ	ENSMUSG00175006845	lncRNA gene	Chr8:24300922-24309468 (+)
C57BL/6NJ	ENSMUSG00215012368	lncRNA gene	Chr8:24074084-24082658 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005024842	lncRNA gene	Chr8:24378479-24387113 (+)
CBA/J	ENSMUSG00210014541	lncRNA gene	Chr8:24152555-24161096 (+)
DBA/2J	ENSMUSG00185040440	lncRNA gene	Chr8:30036170-30044719 (+)
FVB/NJ	ENSMUSG00205004783	lncRNA gene	Chr8:23352588-23361136 (+)
JF1/MsJ	ENSUMUG00000010189	lncRNA gene	Chr8:31802706-31811300 (+)
LP/J	ENSMUSG00230015807	lncRNA gene	Chr8:33693391-33701933 (+)
NOD/ShiLtJ	ENSMUSG00190004792	lncRNA gene	Chr8:24158685-24167223 (+)
NZO/HlLtJ	ENSMUSG00225022004	lncRNA gene	Chr8:37329261-37337812 (+)
PWK/PhJ	ENSLUMG00010027084	lncRNA gene	Chr8:24117600-24126181 (+)
SPRET/EiJ	ENSMSPG00010017751	lncRNA gene	Chr8:24737962-24746427 (+)
WSB/EiJ	ENSIUOG00005011186	lncRNA gene	Chr8:24837494-24846330 (+)

Homology

• Gene Tree
  Gm8110
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24
• RefSeq
  1

• Ensembl
  ENSMUSG00000110322 (Evidence)
• NCBI Gene
  666446

Representative Sequences			Length	Strain/Species
genomic	666446	NCBI Gene Model | MGI Sequence Detail	852	C57BL/6J

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm8110:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr76790	Chr8:29010686-29010688 (+)	-325 bp