Cyp21a2-ps Pseudogene Detail

Summary

• Symbol
  Cyp21a2-ps
• Name
  cytochrome P450, family 21, subfamily a, polypeptide 2 pseudogene
• Synonyms
  21OHB, Cyp21a2ps, Cyp21B, Cyp21-ps1, EG632302, Oh21-2

• Feature Type
  pseudogene
• IDs
  MGI:3645529
  NCBI Gene: 632302
• Alliance
  genome feature page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr17:34938787-34941226 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, 18.29 cM
• Mapping Data
  3 experiments

Strain
Comparison

• SNPs within 2kb
  1 from dbSNP Build 142
• Strain Annotations
  19
• RFLP
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3645529	pseudogene	Chr17:34938405-34941253 (-)
129S1/SvImJ	ENSMUSG00200052405	pseudogene	Chr17:30641959-30644398 (-)
A/J	ENSMUSG00195046949	pseudogene	Chr17:31542156-31544595 (-)
AKR/J	ENSMUSG00220052611	pseudogene	Chr17:30570852-30573405 (-)
BALB/cJ	ENSMUSG00180044301	pseudogene	Chr17:30912031-30914470 (-)
C3H/HeJ	ENSMUSG00175043023	pseudogene	Chr17:30456955-30459508 (-)
C57BL/6NJ	ENSMUSG00215053279	pseudogene	Chr17:30482140-30484579 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0037194	pseudogene	Chr17:31517893-31520427 (-)
CAST/EiJ	ENSTCUG00005051650	pseudogene	Chr17:31500436-31502960 (-)
CBA/J	ENSMUSG00210052286	pseudogene	Chr17:30279056-30281609 (-)
DBA/2J	ENSMUSG00185054515	pseudogene	Chr17:32931296-32933735 (-)
FVB/NJ	ENSMUSG00205053538	pseudogene	Chr17:30800504-30802943 (-)
JF1/MsJ	ENSUMUG00000057405	pseudogene	Chr17:32183967-32186543 (-)
LP/J	ENSMUSG00230054782	pseudogene	Chr17:34040238-34042677 (-)
NOD/ShiLtJ	ENSMUSG00190053241	pseudogene	Chr17:30401942-30404518 (-)
NZO/HlLtJ	ENSMUSG00225054901	pseudogene	Chr17:36053746-36056266 (-)
PWK/PhJ	ENSLUMG00010053444	pseudogene	Chr17:30010631-30013196 (-)
SPRET/EiJ	ENSMSPG00010050072	pseudogene	Chr17:31203517-31206076 (-)
WSB/EiJ	ENSIUOG00005052427	pseudogene	Chr17:31129470-31131994 (-)

Homology

• Gene Tree
  Cyp21a2-ps
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24
• RefSeq
  2

• Ensembl
  ENSMUSG00000092471 (Evidence)
• NCBI Gene
  632302

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000092471	Ensembl Gene Model | MGI Sequence Detail	2440	C57BL/6J
transcript	ENSMUST00000172970	Ensembl | MGI Sequence Detail	1383	Not Applicable

Molecular
Reagents

• All nucleic 10

  Genomic 7

  cDNA 1

  Other 2

Other
Accession IDs

MGD-MRK-1001, MGD-MRK-13022, MGD-MRK-2306, MGD-MRK-2308, MGD-MRK-2309, MGI:88592

References

• Summaries
  All 21
• Earliest
  J:7260 Chaplin DD, et al., Molecular map of the murine S region. Proc Natl Acad Sci U S A. 1983 Nov;80(22):6947-51
• Latest
  J:109470 Riepe FG, et al., Congenital adrenal hyperplasia: the molecular basis of 21-hydroxylase deficiency in H-2(aw18) mice. Endocrinology. 2005 Jun;146(6):2563-74

TSS for Cyp21a2-ps:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr147633	Chr17:34941382-34941395 (-)	-163 bp
Tssr5096	Chr17:34941356-34941363 (-)	-134 bp