Gm8288 Pseudogene Detail

Summary

• Symbol
  Gm8288
• Name
  predicted gene 8288

• Feature Type
  pseudogene
• IDs
  MGI:3645459
  NCBI Gene: 666786
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:75950824-75951413 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, 40.95 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  171 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3645459	pseudogene	Chr13:75950824-75951417 (+)
129S1/SvImJ	ENSMUSG00200014188	pseudogene	Chr13:70380368-70380959 (+)
A/J	ENSMUSG00195025736	pseudogene	Chr13:70940363-70940954 (+)
AKR/J	ENSMUSG00220040340	pseudogene	Chr13:69528947-69529538 (+)
BALB/cJ	ENSMUSG00180001556	pseudogene	Chr13:71438623-71439214 (+)
C3H/HeJ	ENSMUSG00175019859	pseudogene	Chr13:71716911-71717502 (+)
C57BL/6NJ	ENSMUSG00215002593	pseudogene	Chr13:71523670-71524262 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005004003	pseudogene	Chr13:70995535-70996127 (+)
CBA/J	ENSMUSG00210005778	pseudogene	Chr13:71033387-71033978 (+)
DBA/2J	ENSMUSG00185018608	pseudogene	Chr13:74721446-74722037 (+)
FVB/NJ	ENSMUSG00205014278	pseudogene	Chr13:70420081-70420672 (+)
JF1/MsJ	ENSUMUG00000033752	pseudogene	Chr13:74465934-74466526 (+)
LP/J	ENSMUSG00230028165	pseudogene	Chr13:84641860-84642451 (+)
NOD/ShiLtJ	ENSMUSG00190008622	pseudogene	Chr13:71056214-71056805 (+)
NZO/HlLtJ	ENSMUSG00225028453	pseudogene	Chr13:77157291-77157882 (+)
PWK/PhJ	ENSLUMG00010014754	pseudogene	Chr13:70556896-70557487 (+)
SPRET/EiJ	ENSMSPG00010001525	pseudogene	Chr13:71464807-71465390 (+)
WSB/EiJ	ENSIUOG00005017967	pseudogene	Chr13:70258083-70258672 (+)

Homology

• Gene Tree
  Gm8288
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm8288
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000113409 (Evidence)
• NCBI Gene
  666786

Representative Sequences			Length	Strain/Species
genomic	666786	NCBI Gene Model | MGI Sequence Detail	590	C57BL/6J

References

• Summaries
  All 7

  Phenotypes 3
• Earliest
  J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69