Gm7919 Pseudogene Detail

Summary

• Symbol
  Gm7919
• Name
  predicted gene 7919

• Feature Type
  pseudogene
• IDs
  MGI:3645426
  NCBI Gene: 108169112
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr5:93885955-93888642 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, 47.29 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  200 from dbSNP Build 142
• Strain Annotations
  13

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3645426	pseudogene	Chr5:93885925-93888645 (+)
129S1/SvImJ	ENSMUSG00200009996	pseudogene	Chr5:89467204-89467545 (-)
A/J	ENSMUSG00195026555	pseudogene	Chr5:88804622-88807312 (+)
AKR/J	no annotation
BALB/cJ	ENSMUSG00180028234	pseudogene	Chr5:88487797-88490478 (-)
C3H/HeJ	ENSMUSG00175045449	pseudogene	Chr5:90588211-90590891 (-)
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005038301	pseudogene	Chr5:88332263-88334940 (+)
CBA/J	no annotation
DBA/2J	ENSMUSG00185037515	pseudogene	Chr5:91300446-91303127 (-)
FVB/NJ	ENSMUSG00205033341	pseudogene	Chr5:89001514-89003751 (-)
JF1/MsJ	ENSUMUG00000044655	pseudogene	Chr5:95683529-95686216 (+)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190041993	pseudogene	Chr5:88269947-88272628 (-)
NZO/HlLtJ	ENSMUSG00225010235	pseudogene	Chr5:101290564-101293251 (+)
PWK/PhJ	no annotation
SPRET/EiJ	ENSMSPG00010026637	pseudogene	Chr5:90967867-90970560 (-)
WSB/EiJ	ENSIUOG00005030234	pseudogene	Chr5:91428191-91430878 (+)

Homology

• Gene Tree
  Gm7919
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  6 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  1
• Radiation induced
  1
• Spontaneous
  1
• Genomic Mutations
  3 involving Gm7919
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  17
• RefSeq
  1

• Ensembl
  ENSMUSG00000107159 (Evidence)
• NCBI Gene
  108169112

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000107159	Ensembl Gene Model | MGI Sequence Detail	2688	C57BL/6J
transcript	ENSMUST00000202043	Ensembl | MGI Sequence Detail	1389	Not Applicable

References

• Summaries
  All 10

  Phenotypes 6
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17