Gm7307 Pseudogene Detail

Summary

• Symbol
  Gm7307
• Name
  predicted gene 7307

• Feature Type
  pseudogene
• IDs
  MGI:3645397
  NCBI Gene: 640694
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr16:89960165-89960508 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, 51.53 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  173 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3645397	pseudogene	Chr16:89960068-89960508 (+)
129S1/SvImJ	ENSMUSG00200039056	pseudogene	Chr16:86857490-86857880 (+)
A/J	ENSMUSG00195030035	pseudogene	Chr16:86644555-86644945 (+)
AKR/J	ENSMUSG00220016429	pseudogene	Chr16:86830409-86830799 (+)
BALB/cJ	ENSMUSG00180016230	pseudogene	Chr16:86717883-86718273 (+)
C3H/HeJ	ENSMUSG00175017402	pseudogene	Chr16:87055677-87056067 (+)
C57BL/6NJ	ENSMUSG00215033742	pseudogene	Chr16:86845556-86845946 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005020216	pseudogene	Chr16:86395158-86395551 (+)
CBA/J	ENSMUSG00210041782	pseudogene	Chr16:86941066-86941456 (+)
DBA/2J	ENSMUSG00185034993	pseudogene	Chr16:86888839-86889229 (+)
FVB/NJ	ENSMUSG00205030035	pseudogene	Chr16:86676066-86676456 (+)
JF1/MsJ	ENSUMUG00000044434	pseudogene	Chr16:87016752-87017145 (+)
LP/J	ENSMUSG00230034822	pseudogene	Chr16:89403135-89403525 (+)
NOD/ShiLtJ	ENSMUSG00190029528	pseudogene	Chr16:86872317-86872707 (+)
NZO/HlLtJ	ENSMUSG00225031058	pseudogene	Chr16:92551010-92551400 (+)
PWK/PhJ	ENSLUMG00010014643	pseudogene	Chr16:86646034-86646427 (+)
SPRET/EiJ	ENSMSPG00010030045	pseudogene	Chr16:87816962-87817348 (+)
WSB/EiJ	ENSIUOG00005020794	pseudogene	Chr16:86789144-86789534 (+)

Homology

• Gene Tree
  Gm7307
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  4
• Targeted
  3
• Genomic Mutations
  4 involving Gm7307
• Find Mice (IMSR)
  2 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000116553 (Evidence)
• NCBI Gene
  640694

Representative Sequences			Length	Strain/Species
genomic	640694	NCBI Gene Model | MGI Sequence Detail	344	C57BL/6J

References

• Summaries
  All 9

  Phenotypes 5
• Earliest
  J:117029 Davisson M, et al., Impact of trisomy on fertility and meiosis in male mice. Hum Reprod. 2007 Feb;22(2):468-76
• Latest
  J:223383 Arbogast T, et al., Deletion of the App-Runx1 region in mice models human partial monosomy 21. Dis Model Mech. 2015 Jun;8(6):623-34