Zfp813-ps Pseudogene Detail

Summary

• Symbol
  Zfp813-ps
• Name
  zinc finger protein 813, pseudogene
• Synonyms
  EG636910, Zfp813

• Feature Type
  pseudogene
  BioType Conflict
  
• IDs
  MGI:3645355
  NCBI Gene: 636910
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr1:117531888-117554792 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, 52.14 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  648 from dbSNP Build 142
• Strain Annotations
  33

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3645355	pseudogene	Chr1:117531608-117555757 (+)
129S1/SvImJ	ENSMUSG00200002066	pseudogene	Chr1:115093178-115095683 (+)
129S1/SvImJ	ENSMUSG00200002046	lncRNA gene	Chr1:115071516-115074122 (+)
A/J	ENSMUSG00195004784	pseudogene	Chr1:114292726-114295231 (+)
A/J	ENSMUSG00195004776	lncRNA gene	Chr1:114271080-114273686 (+)
AKR/J	ENSMUSG00220025419	pseudogene	Chr1:114335946-114338451 (+)
AKR/J	ENSMUSG00220025373	lncRNA gene	Chr1:114314285-114316891 (+)
BALB/cJ	ENSMUSG00180012989	pseudogene	Chr1:114658523-114661028 (+)
BALB/cJ	ENSMUSG00180012966	lncRNA gene	Chr1:114636861-114639467 (+)
C3H/HeJ	ENSMUSG00175019420	lncRNA gene	Chr1:114502138-114504744 (+)
C3H/HeJ	ENSMUSG00175019460	pseudogene	Chr1:114523782-114526287 (+)
C57BL/6NJ	ENSMUSG00215013498	lncRNA gene	Chr1:114537488-114540094 (+)
C57BL/6NJ	ENSMUSG00215013604	pseudogene	Chr1:114559131-114561636 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005006635	lncRNA gene	Chr1:113660828-113663430 (+)
CAST/EiJ	ENSTCUG00005006639	pseudogene	Chr1:113679044-113680457 (+)
CBA/J	ENSMUSG00210001361	lncRNA gene	Chr1:114390323-114392929 (+)
CBA/J	ENSMUSG00210001370	pseudogene	Chr1:114411967-114414472 (+)
DBA/2J	ENSMUSG00185013959	lncRNA gene	Chr1:118779675-118782281 (+)
DBA/2J	ENSMUSG00185013974	pseudogene	Chr1:118801320-118803825 (+)
FVB/NJ	ENSMUSG00205012874	lncRNA gene	Chr1:113787941-113790547 (+)
FVB/NJ	ENSMUSG00205012957	pseudogene	Chr1:113809598-113812103 (+)
JF1/MsJ	ENSUMUG00000028633	pseudogene	Chr1:117729180-117731685 (+)
LP/J	ENSMUSG00230008987	pseudogene	Chr1:118186854-118189359 (+)
LP/J	ENSMUSG00230009035	lncRNA gene	Chr1:118165191-118167797 (+)
NOD/ShiLtJ	ENSMUSG00190006624	lncRNA gene	Chr1:114390077-114392683 (+)
NOD/ShiLtJ	ENSMUSG00190006641	pseudogene	Chr1:114411721-114414226 (+)
NZO/HlLtJ	ENSMUSG00225002640	pseudogene	Chr1:122020449-122022954 (+)
NZO/HlLtJ	ENSMUSG00225002742	lncRNA gene	Chr1:121998803-122001409 (+)
PWK/PhJ	ENSLUMG00010014948	pseudogene	Chr1:113841669-113844006 (+)
PWK/PhJ	ENSLUMG00010014934	lncRNA gene	Chr1:113819983-113822583 (+)
SPRET/EiJ	ENSMSPG00010017398	pseudogene	Chr1:116303240-116306083 (+)
WSB/EiJ	ENSIUOG00005003102	lncRNA gene	Chr1:114139507-114142113 (+)
WSB/EiJ	ENSIUOG00005003117	pseudogene	Chr1:114161178-114163683 (+)

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  2
• Radiation induced
  1
• Genomic Mutations
  3 involving Zfp813-ps
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  39
• RefSeq
  1

• Ensembl
  ENSMUSG00000101373 (Evidence), ENSMUSG00000107979 (Evidence)
• NCBI Gene
  636910

Representative Sequences			Length	Strain/Species
genomic	636910	NCBI Gene Model | MGI Sequence Detail	22905	C57BL/6J

References

• Summaries
  All 9

  Phenotypes 4
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:7938 Juriloff DM, et al., Genetic and developmental studies of a new mouse mutation that produces otocephaly. J Craniofac Genet Dev Biol. 1985;5(2):121-45