Rpl3-ps2 Pseudogene Detail

Summary

• Symbol
  Rpl3-ps2
• Name
  ribosomal protein L3, pseudogene 2
• Synonyms
  Gm6873

• Feature Type
  pseudogene
• IDs
  MGI:3645345
  NCBI Gene: 628388
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  ChrX:73214259-73215472 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 37.82 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  74 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3645345	pseudogene	ChrX:73214233-73215541 (+)
129S1/SvImJ	ENSMUSG00200043965	pseudogene	ChrX:55275071-55276280 (+)
A/J	ENSMUSG00195035955	pseudogene	ChrX:58951101-58952316 (+)
AKR/J	ENSMUSG00220047099	pseudogene	ChrX:54253419-54254634 (+)
BALB/cJ	ENSMUSG00180050515	pseudogene	ChrX:55531837-55533052 (+)
C3H/HeJ	ENSMUSG00175037604	pseudogene	ChrX:59115477-59116693 (+)
C57BL/6NJ	ENSMUSG00215041702	pseudogene	ChrX:55615515-55616728 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005043318	pseudogene	ChrX:57031786-57032997 (+)
CAST/EiJ	ENSTCUG00005014558	pseudogene	Chr18:44525454-44526661 (-)
CBA/J	ENSMUSG00210047088	pseudogene	ChrX:55796148-55797363 (+)
DBA/2J	ENSMUSG00185036460	pseudogene	ChrX:68217821-68219036 (+)
FVB/NJ	ENSMUSG00205042788	pseudogene	ChrX:55097157-55098372 (+)
JF1/MsJ	ENSUMUG00000046641	pseudogene	ChrX:88955501-88956714 (+)
LP/J	ENSMUSG00230036977	pseudogene	ChrX:74797193-74798408 (+)
NOD/ShiLtJ	ENSMUSG00190043892	pseudogene	ChrX:55036107-55037322 (+)
NZO/HlLtJ	ENSMUSG00225048989	pseudogene	ChrX:80001593-80002807 (+)
PWK/PhJ	ENSLUMG00010048135	pseudogene	ChrX:54776801-54778010 (+)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005049532	pseudogene	ChrX:55863547-55864754 (+)

Homology

• Gene Tree
  Rpl3-ps2
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000084131 (Evidence)
• NCBI Gene
  628388

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000084131	Ensembl Gene Model | MGI Sequence Detail	1214	C57BL/6J
transcript	ENSMUST00000117131	Ensembl | MGI Sequence Detail	1214	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;