Gm8121 Pseudogene Detail

Summary

• Symbol
  Gm8121
• Name
  predicted pseudogene 8121

• Feature Type
  pseudogene
• IDs
  MGI:3645325
  NCBI Gene: 666465
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr5:57765911-57766409 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, 31.29 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  114 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3645325	pseudogene	Chr5:57765723-57766495 (+)
129S1/SvImJ	ENSMUSG00200000078	pseudogene	Chr5:53321932-53322430 (+)
A/J	ENSMUSG00195000524	pseudogene	Chr5:52703778-52704276 (+)
AKR/J	ENSMUSG00220007194	pseudogene	Chr5:52769438-52769936 (+)
BALB/cJ	ENSMUSG00180006613	pseudogene	Chr5:52475238-52475736 (+)
C3H/HeJ	ENSMUSG00175001723	pseudogene	Chr5:54504300-54504798 (+)
C57BL/6NJ	ENSMUSG00215002827	pseudogene	Chr5:53268407-53268905 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005000691	pseudogene	Chr5:52623002-52623500 (+)
CBA/J	ENSMUSG00210000331	pseudogene	Chr5:53462892-53463390 (+)
DBA/2J	ENSMUSG00185000136	pseudogene	Chr5:55325289-55325787 (+)
FVB/NJ	ENSMUSG00205011726	pseudogene	Chr5:52314229-52314727 (+)
JF1/MsJ	ENSUMUG00000001158	pseudogene	Chr5:59923710-59924208 (+)
LP/J	ENSMUSG00230010514	pseudogene	Chr5:59993908-59994406 (+)
NOD/ShiLtJ	ENSMUSG00190000716	pseudogene	Chr5:52394831-52395329 (+)
NZO/HlLtJ	ENSMUSG00225002719	pseudogene	Chr5:65115813-65116311 (+)
PWK/PhJ	ENSLUMG00010004510	pseudogene	Chr5:52532265-52532763 (+)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005000139	pseudogene	Chr5:55356584-55357082 (+)

Homology

• Gene Tree
  Gm8121
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  2
• Spontaneous
  1
• Genomic Mutations
  3 involving Gm8121
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000051116 (Evidence)
• NCBI Gene
  666465

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000051116	Ensembl Gene Model | MGI Sequence Detail	499	C57BL/6J
transcript	ENSMUST00000153583	Ensembl | MGI Sequence Detail	499	Not Applicable

References

• Summaries
  All 8

  Phenotypes 4
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17