H1f11-ps Pseudogene Detail

Summary

• Symbol
  H1f11-ps
• Name
  H1.11 linker histone, pseudogene
• Synonyms
  Gm6970

• Feature Type
  pseudogene
• IDs
  MGI:3645322
  NCBI Gene: 629389
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr19:47158908-47159573 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, 39.39 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  136 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3645322	pseudogene	Chr19:47158865-47159639 (-)
129S1/SvImJ	ENSMUSG00200021795	pseudogene	Chr19:43867203-43867868 (-)
A/J	ENSMUSG00195019233	pseudogene	Chr19:43996441-43997106 (-)
AKR/J	ENSMUSG00220019316	pseudogene	Chr19:43803764-43804429 (-)
BALB/cJ	ENSMUSG00180021758	pseudogene	Chr19:44248483-44249148 (-)
C3H/HeJ	ENSMUSG00175006437	pseudogene	Chr19:43796700-43797365 (-)
C57BL/6NJ	ENSMUSG00215005144	pseudogene	Chr19:43857661-43858326 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0023054	protein coding gene	Chr19:43852280-43852924 (-)
CAST/EiJ	ENSTCUG00005016739	pseudogene	Chr19:43455727-43456384 (-)
CBA/J	ENSMUSG00210019268	pseudogene	Chr19:43876207-43876872 (-)
DBA/2J	ENSMUSG00185009302	pseudogene	Chr19:44371840-44372505 (-)
FVB/NJ	ENSMUSG00205038699	pseudogene	Chr19:43292017-43292682 (-)
JF1/MsJ	ENSUMUG00000047180	pseudogene	Chr19:44530673-44531336 (-)
LP/J	ENSMUSG00230026354	pseudogene	Chr19:45136785-45137450 (-)
NOD/ShiLtJ	ENSMUSG00190005898	pseudogene	Chr19:43740524-43741189 (-)
NZO/HlLtJ	ENSMUSG00225044889	pseudogene	Chr19:48733376-48734041 (-)
PWK/PhJ	ENSLUMG00010001337	pseudogene	Chr19:43697012-43697677 (-)
SPRET/EiJ	ENSMSPG00010007905	pseudogene	Chr19:43429028-43429693 (-)
WSB/EiJ	ENSIUOG00005007178	pseudogene	Chr19:43245343-43246008 (-)

Homology

• Gene Tree
  H1f11-ps
  

Mutations,
Alleles, and
Phenotypes

• Incidental Mutations
  Mutagenetix , APF
• Find Mice (IMSR)
  6 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000091230 (Evidence)
• NCBI Gene
  629389

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000091230	Ensembl Gene Model | MGI Sequence Detail	666	C57BL/6J
transcript	ENSMUST00000169692	Ensembl | MGI Sequence Detail	666	Not Applicable

Other
Accession IDs

MGI:6331234

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for H1f11-ps:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr159707	Chr19:47159638-47159642 (-)	-67 bp