Gm8529 Pseudogene Detail

Summary

• Symbol
  Gm8529
• Name
  predicted gene 8529

• Feature Type
  pseudogene
• IDs
  MGI:3645224
  NCBI Gene: 667233
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr18:50353138-50353882 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, 27.28 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  129 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3645224	pseudogene	Chr18:50352962-50353893 (-)
129S1/SvImJ	ENSMUSG00200030692	pseudogene	Chr18:47396586-47397330 (-)
A/J	ENSMUSG00195025578	pseudogene	Chr18:47546631-47547375 (-)
AKR/J	ENSMUSG00220021576	pseudogene	Chr18:47492785-47493529 (-)
BALB/cJ	ENSMUSG00180007815	pseudogene	Chr18:48078239-48078983 (-)
C3H/HeJ	ENSMUSG00175011215	pseudogene	Chr18:47676835-47677579 (-)
C57BL/6NJ	ENSMUSG00215010025	pseudogene	Chr18:47083405-47084149 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010265	pseudogene	Chr18:47080904-47081823 (-)
CAST/EiJ	ENSTCUG00005013992	pseudogene	Chr18:46956585-46957699 (-)
CBA/J	ENSMUSG00210022539	pseudogene	Chr18:47635844-47636588 (-)
DBA/2J	ENSMUSG00185028673	pseudogene	Chr18:47536820-47537564 (-)
FVB/NJ	ENSMUSG00205015701	pseudogene	Chr18:47013022-47013766 (-)
JF1/MsJ	ENSUMUG00000028486	pseudogene	Chr18:47510267-47511014 (-)
LP/J	ENSMUSG00230029227	pseudogene	Chr18:49573193-49573937 (-)
NOD/ShiLtJ	ENSMUSG00190030107	pseudogene	Chr18:47320677-47321421 (-)
NZO/HlLtJ	ENSMUSG00225027618	pseudogene	Chr18:49475923-49476667 (-)
PWK/PhJ	ENSLUMG00010021599	pseudogene	Chr18:47655014-47655761 (-)
SPRET/EiJ	ENSMSPG00010013403	pseudogene	Chr18:47962266-47962739 (-)
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm8529
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Spontaneous
  1
• Genomic Mutations
  1 involving Gm8529
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000098058 (Evidence)
• NCBI Gene
  667233

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000098058	Ensembl Gene Model | MGI Sequence Detail	745	C57BL/6J
transcript	ENSMUST00000183298	Ensembl | MGI Sequence Detail	745	Not Applicable

References

• Summaries
  All 6

  Phenotypes 1
• Earliest
  J:327181 Lewis MA, et al., Identification and characterisation of spontaneous mutations causing deafness from a targeted knockout programme. BMC Biol. 2022 Mar 17;20(1):67