Ppp1r2-ps4 Pseudogene Detail

Summary

• Symbol
  Ppp1r2-ps4
• Name
  protein phosphatase 1, regulatory (inhibitor) subunit 2, pseudogene 4

• Feature Type
  pseudogene
• IDs
  MGI:3645199
  NCBI Gene: 623488
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr9:66712588-66713220 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, 36.14 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  90 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3645199	pseudogene	Chr9:66711911-66713528 (-)
129S1/SvImJ	ENSMUSG00200044431	pseudogene	Chr9:63811059-63811695 (-)
A/J	ENSMUSG00195027420	pseudogene	Chr9:63531807-63532439 (-)
AKR/J	ENSMUSG00220042930	pseudogene	Chr9:63669844-63670476 (-)
BALB/cJ	ENSMUSG00180018097	pseudogene	Chr9:63651344-63651976 (-)
C3H/HeJ	ENSMUSG00175013389	pseudogene	Chr9:63665044-63665676 (-)
C57BL/6NJ	ENSMUSG00215032218	pseudogene	Chr9:63654937-63655569 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005032756	pseudogene	Chr9:63563531-63564154 (-)
CBA/J	ENSMUSG00210014426	pseudogene	Chr9:63752118-63752750 (-)
DBA/2J	ENSMUSG00185034967	pseudogene	Chr9:63777015-63777647 (-)
FVB/NJ	ENSMUSG00205033640	pseudogene	Chr9:64095680-64096303 (-)
JF1/MsJ	ENSUMUG00000042961	pseudogene	Chr9:63852251-63852874 (-)
LP/J	ENSMUSG00230027759	pseudogene	Chr9:64009957-64010594 (-)
NOD/ShiLtJ	ENSMUSG00190022403	pseudogene	Chr9:63877144-63877776 (-)
NZO/HlLtJ	ENSMUSG00225046685	pseudogene	Chr9:64076642-64077274 (-)
PWK/PhJ	ENSLUMG00010026569	pseudogene	Chr9:63805310-63805930 (-)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005028180	pseudogene	Chr9:63265730-63266366 (-)
WSB/EiJ	ENSIUOG00005015060	pseudogene	Chr17:3218259-3218874 (-)

Homology

• Gene Tree
  Ppp1r2-ps4
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Ppp1r2-ps4
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000059237 (Evidence)
• NCBI Gene
  623488

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000059237	Ensembl Gene Model | MGI Sequence Detail	633	C57BL/6J
transcript	ENSMUST00000112182	Ensembl | MGI Sequence Detail	633	Not Applicable

References

• Summaries
  All 6

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;