Gm6520 Pseudogene Detail

Summary

• Symbol
  Gm6520
• Name
  predicted gene 6520

• Feature Type
  pseudogene
• IDs
  MGI:3645184
  NCBI Gene: 624684
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr3:157594102-157594511 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, 81.54 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  142 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3645184	pseudogene	Chr3:157594102-157594540 (-)
129S1/SvImJ	ENSMUSG00200000118	pseudogene	Chr3:154595073-154595482 (-)
A/J	ENSMUSG00195002723	pseudogene	Chr3:154721753-154722162 (-)
AKR/J	ENSMUSG00220011135	pseudogene	Chr3:153145887-153146296 (-)
BALB/cJ	ENSMUSG00180006705	pseudogene	Chr3:154573467-154573876 (-)
C3H/HeJ	ENSMUSG00175003329	pseudogene	Chr3:154189944-154190353 (-)
C57BL/6NJ	ENSMUSG00215004393	pseudogene	Chr3:154800927-154801336 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011129	pseudogene	Chr3:150751426-150751836 (-)
CAST/EiJ	ENSTCUG00005000059	pseudogene	Chr3:155238943-155239351 (-)
CBA/J	ENSMUSG00210000361	pseudogene	Chr3:154820178-154820587 (-)
DBA/2J	ENSMUSG00185000170	pseudogene	Chr3:155470852-155471261 (-)
FVB/NJ	ENSMUSG00205000104	pseudogene	Chr3:153733116-153733525 (-)
JF1/MsJ	ENSUMUG00000000077	pseudogene	Chr3:154214550-154214959 (-)
LP/J	ENSMUSG00230009593	pseudogene	Chr3:157339706-157340115 (-)
NOD/ShiLtJ	ENSMUSG00190007530	pseudogene	Chr3:155823236-155823645 (-)
NZO/HlLtJ	ENSMUSG00225006157	pseudogene	Chr3:159865254-159865663 (-)
PWK/PhJ	ENSLUMG00010000057	pseudogene	Chr3:154154942-154155351 (-)
SPRET/EiJ	ENSMSPG00010000309	pseudogene	Chr3:155520273-155520682 (-)
WSB/EiJ	ENSIUOG00005003425	pseudogene	Chr3:154943963-154944372 (-)

Homology

• Gene Tree
  Gm6520
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22

• Ensembl
  ENSMUSG00000104862 (Evidence)
• NCBI Gene
  624684

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000104862	Ensembl Gene Model | MGI Sequence Detail	410	C57BL/6J
transcript	ENSMUST00000200636	Ensembl | MGI Sequence Detail	410	Not Applicable

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for Gm6520:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr36291	Chr3:157594558-157594565 (-)	-51 bp