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Gm5339 Pseudogene Detail
Summary
  • Symbol
    Gm5339
  • Name
    predicted gene 5339
Location &
Maps
more
  • Sequence Map
    Chr7:102217683-102218623 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 54.76 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    141 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3645143
 pseudogene Chr7:102217683-102218942 (-)
129S1/SvImJ ENSMUSG00200050823
 pseudogene Chr7:89057750-89059009 (-)
A/J ENSMUSG00195054827
 pseudogene Chr7:93563761-93565020 (-)
AKR/J ENSMUSG00220051173
 pseudogene Chr7:86980235-86981494 (-)
BALB/cJ ENSMUSG00180035954
 pseudogene Chr7:90236434-90237693 (-)
C3H/HeJ ENSMUSG00175052047
 pseudogene Chr7:90890586-90891845 (-)
C57BL/6NJ ENSMUSG00215037340
 pseudogene Chr7:90064898-90066157 (-)
CAROLI/EiJ no annotation
CAST/EiJ ENSTCUG00005053229
 pseudogene Chr7:93469286-93470545 (-)
CBA/J ENSMUSG00210026041
 pseudogene Chr7:90743973-90745232 (-)
DBA/2J ENSMUSG00185057221
 pseudogene Chr7:95066457-95067716 (-)
FVB/NJ ENSMUSG00205047423
 pseudogene Chr7:90734611-90735870 (-)
JF1/MsJ ENSUMUG00000052017
 pseudogene Chr7:99969812-99971071 (-)
LP/J ENSMUSG00230048560
 pseudogene Chr7:101167713-101168972 (-)
NOD/ShiLtJ ENSMUSG00190045782
 pseudogene Chr7:91002071-91003309 (-)
NZO/HlLtJ ENSMUSG00225051401
 pseudogene Chr7:99402149-99403408 (-)
PWK/PhJ ENSLUMG00010051180
 pseudogene Chr7:89216054-89217313 (-)
SPRET/EiJ ENSMSPG00010013027
 pseudogene Chr7:90463329-90464586 (-)
WSB/EiJ ENSIUOG00005049723
 pseudogene Chr7:91329763-91331022 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    9 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Genomic Mutations
    2 involving Gm5339
  • Find Mice (IMSR)
    0 strains or lines available
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
Sequences &
Gene Models
less
  • All Sequences
    21
Representative SequencesLengthStrain/SpeciesFlank
genomic 384699 NCBI Gene Model | MGI Sequence Detail 941 C57BL/6J ±  kb
For the selected sequence
References
more
  • Summaries
    All 13
    Phenotypes 9
  • Earliest
    J:88307 Giometti CS, et al., The analysis of recessive lethal mutations in mice by using two-dimensional gel electrophoresis of liver proteins. Mutat Res. 1990 Sep;242(1):47-55
  • Latest
    J:123187 Cohen-Barak O, et al., Stem cell transplantation demonstrates that Sox6 represses epsilon y globin expression in definitive erythropoiesis of adult mice. Exp Hematol. 2007 Mar;35(3):358-67
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/15/2026
MGI 6.29 		The Jackson Laboratory