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Cd9-ps Pseudogene Detail
Summary
  • Symbol
    Cd9-ps
  • Name
    Cd9 antigen, pseudogene
  • Synonyms
    EG668579
  • Feature Type
    pseudogene
  • IDs
    MGI:3645134
    NCBI Gene: 668579
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:41332082-41332731 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 28.25 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    87 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3645134
 pseudogene Chr7:41331675-41332812 (-)
129S1/SvImJ MGP_129S1SvImJ_G0013882
 pseudogene Chr7:41466835-41467484 (-)
A/J MGP_AJ_G0013901
 pseudogene Chr7:40519683-40520332 (-)
AKR/J MGP_AKRJ_G0013836
 pseudogene Chr7:41783130-41783779 (-)
BALB/cJ MGP_BALBcJ_G0013866
 pseudogene Chr7:40776500-40777149 (-)
C3H/HeJ MGP_C3HHeJ_G0013693
 pseudogene Chr7:42390168-42390817 (-)
C57BL/6NJ MGP_C57BL6NJ_G0014293
 pseudogene Chr7:43540769-43541418 (-)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0013361
 pseudogene Chr7:33542647-33543296 (-)
CBA/J MGP_CBAJ_G0013674
 pseudogene Chr7:44855493-44856142 (-)
DBA/2J MGP_DBA2J_G0013755
 pseudogene Chr7:40415988-40416625 (-)
FVB/NJ MGP_FVBNJ_G0013752
 pseudogene Chr7:40098953-40117875 (-)
LP/J MGP_LPJ_G0013827
 pseudogene Chr7:41954921-41955570 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0013778
 pseudogene Chr7:43728159-43728796 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0014248
 pseudogene Chr7:41029910-41030559 (-)
PWK/PhJ MGP_PWKPhJ_G0013169
 pseudogene Chr7:33511318-33511955 (-)
SPRET/EiJ MGP_SPRETEiJ_G0012783
 pseudogene Chr6:125310274-125349386 (-)
WSB/EiJ MGP_WSBEiJ_G0013416
 pseudogene Chr7:41479645-41480282 (-)



Homology
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    22
  • RefSeq
    2
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000092193 Ensembl Gene Model | MGI Sequence Detail 650 C57BL/6J ±  kb
transcript ENSMUST00000174687 Ensembl | MGI Sequence Detail 650 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 5
  • Earliest
    J:125082 Young JM, et al., V2R gene families degenerated in primates, dog and cow, but expanded in opossum. Trends Genet. 2007 May;23(5):212-5
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory