Gm7543 Pseudogene Detail

Summary

• Symbol
  Gm7543
• Name
  predicted gene 7543

• Feature Type
  pseudogene
• IDs
  MGI:3645066
  NCBI Gene: 100417613
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr15:52122519-52123090 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, 19.81 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  167 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3645066	pseudogene	Chr15:52122358-52123287 (+)
129S1/SvImJ	ENSMUSG00200019399	pseudogene	Chr15:49117934-49118505 (+)
A/J	ENSMUSG00195005764	pseudogene	Chr15:49126482-49127053 (+)
AKR/J	ENSMUSG00220018097	pseudogene	Chr15:49120900-49121471 (+)
BALB/cJ	ENSMUSG00180004890	pseudogene	Chr15:49086130-49086701 (+)
C3H/HeJ	ENSMUSG00175020522	pseudogene	Chr15:49301365-49301936 (+)
C57BL/6NJ	ENSMUSG00215003259	pseudogene	Chr15:49080626-49081197 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005013973	pseudogene	Chr15:48972599-48973149 (+)
CBA/J	ENSMUSG00210026541	pseudogene	Chr15:49182452-49183023 (+)
DBA/2J	ENSMUSG00185013166	pseudogene	Chr15:49153728-49154299 (+)
FVB/NJ	ENSMUSG00205015307	pseudogene	Chr15:48969984-48970555 (+)
JF1/MsJ	ENSUMUG00000023052	pseudogene	Chr15:48992073-48992621 (+)
LP/J	ENSMUSG00230008999	pseudogene	Chr15:52478708-52479279 (+)
NOD/ShiLtJ	ENSMUSG00190008543	pseudogene	Chr15:49135316-49135887 (+)
NZO/HlLtJ	ENSMUSG00225028868	pseudogene	Chr15:52791955-52792526 (+)
PWK/PhJ	ENSLUMG00010012329	pseudogene	Chr15:49205865-49206413 (+)
SPRET/EiJ	ENSMSPG00010006955	pseudogene	Chr15:50204817-50205369 (+)
WSB/EiJ	ENSIUOG00005021885	pseudogene	Chr15:49179555-49180103 (+)

Homology

• Gene Tree
  Gm7543
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  2
• Genomic Mutations
  2 involving Gm7543
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000115738 (Evidence)
• NCBI Gene
  100417613

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000115738	Ensembl Gene Model | MGI Sequence Detail	572	C57BL/6J
transcript	ENSMUST00000226174	Ensembl | MGI Sequence Detail	572	Not Applicable

References

• Summaries
  All 9

  Phenotypes 5
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
• Latest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6