Gm6767 Pseudogene Detail

Summary

• Symbol
  Gm6767
• Name
  predicted gene 6767

• Feature Type
  pseudogene
• IDs
  MGI:3645053
  NCBI Gene: 627543
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr16:51182815-51184195 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, 32.08 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  192 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3645053	pseudogene	Chr16:51182530-51184261 (-)
129S1/SvImJ	ENSMUSG00200021809	pseudogene	Chr16:48055916-48057296 (-)
A/J	ENSMUSG00195003630	pseudogene	Chr16:47672681-47674061 (-)
AKR/J	ENSMUSG00220023135	pseudogene	Chr16:48032399-48033779 (-)
BALB/cJ	ENSMUSG00180029980	pseudogene	Chr16:47877281-47878661 (-)
C3H/HeJ	ENSMUSG00175026987	pseudogene	Chr16:48191805-48193185 (-)
C57BL/6NJ	ENSMUSG00215008987	pseudogene	Chr16:47987958-47989338 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005012963	pseudogene	Chr16:48262349-48263731 (-)
CBA/J	ENSMUSG00210016881	pseudogene	Chr16:48190495-48191875 (-)
DBA/2J	ENSMUSG00185011072	pseudogene	Chr16:48057437-48058817 (-)
FVB/NJ	ENSMUSG00205013663	pseudogene	Chr16:47956174-47957554 (-)
JF1/MsJ	ENSUMUG00000030410	pseudogene	Chr16:48295662-48297044 (-)
LP/J	ENSMUSG00230029084	pseudogene	Chr16:50615156-50616536 (-)
NOD/ShiLtJ	ENSMUSG00190019466	pseudogene	Chr16:48092385-48093765 (-)
NZO/HlLtJ	ENSMUSG00225026128	pseudogene	Chr16:53711367-53712747 (-)
PWK/PhJ	ENSLUMG00010028049	pseudogene	Chr16:48104957-48106339 (-)
SPRET/EiJ	ENSMSPG00010007873	pseudogene	Chr16:48375047-48376427 (-)
WSB/EiJ	ENSIUOG00005013485	pseudogene	Chr16:48238381-48239761 (-)

Homology

• Gene Tree
  Gm6767
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000081453 (Evidence)
• NCBI Gene
  627543

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000081453	Ensembl Gene Model | MGI Sequence Detail	1381	C57BL/6J
transcript	ENSMUST00000118650	Ensembl | MGI Sequence Detail	1381	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm6767:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr141393	Chr16:51184252-51184264 (-)	-63 bp