Gm7848 Pseudogene Detail

Summary

• Symbol
  Gm7848
• Name
  predicted gene 7848

• Feature Type
  pseudogene
• IDs
  MGI:3645032
  NCBI Gene: 101056304
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr7:11299344-11300061 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, 7.10 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  25 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3645032	pseudogene	Chr7:11299307-11300135 (+)
129S1/SvImJ	ENSMUSG00200042929	pseudogene	Chr7:4970195-4970912 (+)
A/J	ENSMUSG00195052408	pseudogene	Chr7:5058675-5059392 (+)
AKR/J	no annotation
BALB/cJ	ENSMUSG00180051641	pseudogene	Chr7:5017488-5018205 (+)
C3H/HeJ	ENSMUSG00175051037	pseudogene	Chr7:5344343-5345060 (+)
C57BL/6NJ	ENSMUSG00215044893	pseudogene	Chr7:5675645-5676362 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	ENSMUSG00210048397	pseudogene	Chr7:4640352-4641069 (+)
DBA/2J	ENSMUSG00185048245	pseudogene	Chr7:8172673-8173390 (+)
FVB/NJ	ENSMUSG00205048765	pseudogene	Chr7:5397247-5397964 (+)
JF1/MsJ	ENSUMUG00000052409	pseudogene	Chr7:7807848-7808565 (+)
LP/J	ENSMUSG00230048283	pseudogene	Chr7:12355043-12355760 (+)
NOD/ShiLtJ	ENSMUSG00190050881	pseudogene	Chr7:5217102-5217819 (+)
NZO/HlLtJ	ENSMUSG00225022114	pseudogene	Chr7:9842077-9842794 (+)
NZO/HlLtJ	ENSMUSG00225022826	pseudogene	Chr7:9638027-9638744 (-)
PWK/PhJ	ENSLUMG00010051191	pseudogene	Chr7:8937925-8938641 (+)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005052677	pseudogene	Chr7:5280402-5281119 (+)

Homology

• Gene Tree
  Gm7848
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000110149 (Evidence)
• NCBI Gene
  101056304

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000110149	Ensembl Gene Model | MGI Sequence Detail	718	C57BL/6J
transcript	ENSMUST00000210739	Ensembl | MGI Sequence Detail	718	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;