About   Help   FAQ
Gm5535 Gene Detail
Summary
  • Symbol
    Gm5535
  • Name
    predicted gene 5535
Location &
Maps
more
  • Sequence Map
    Chr2:144015070-144031210 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 70.95 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    428 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3645019
 lncRNA gene Chr2:143940735-144049915 (-)
129S1/SvImJ ENSMUSG00200007635
 lncRNA gene Chr2:141015007-141117747 (-)
A/J ENSMUSG00195016161
 lncRNA gene Chr2:141192115-141293876 (-)
AKR/J ENSMUSG00220038897
 lncRNA gene Chr2:140725981-140835178 (-)
BALB/cJ ENSMUSG00180028936
 lncRNA gene Chr2:140840814-140950002 (-)
C3H/HeJ ENSMUSG00175032647
 lncRNA gene Chr2:141387998-141497167 (-)
C57BL/6NJ ENSMUSG00215020976
 lncRNA gene Chr2:140896800-141005982 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0005490
 lincRNA gene Chr2:136426981-136443773 (-)
CAST/EiJ ENSTCUG00005011119
 lncRNA gene Chr2:140050173-140151795 (-)
CBA/J ENSMUSG00210041147
 lncRNA gene Chr2:141307230-141416403 (-)
DBA/2J ENSMUSG00185041230
 lncRNA gene Chr2:140893289-140996059 (-)
FVB/NJ ENSMUSG00205027030
 lncRNA gene Chr2:140071079-140172761 (-)
JF1/MsJ ENSUMUG00000035099
 lncRNA gene Chr2:140694079-140796856 (-)
LP/J no annotation
NOD/ShiLtJ ENSMUSG00190033777
 lncRNA gene Chr2:140979465-141088654 (-)
NZO/HlLtJ no annotation
PWK/PhJ ENSLUMG00010040993
 lncRNA gene Chr2:140736679-140839308 (-)
SPRET/EiJ ENSMSPG00010028476
 lncRNA gene Chr2:143223786-143325961 (-)
WSB/EiJ ENSIUOG00005023861
 lncRNA gene Chr2:140764162-140865902 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
  • All Mutations and Alleles
    6
  • Chemically induced (other)
    1
  • Gene trapped
    3
  • Radiation induced
    1
  • Targeted
    1
  • Genomic Mutations
    2 involving Gm5535
  • Find Mice (IMSR)
    13 strains or lines available
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
  • cDNA Data
    3
Sequences &
Gene Models
less
  • All Sequences
    36
  • RefSeq
    1
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 433481 NCBI Gene Model | MGI Sequence Detail 16141 C57BL/6J ±  kb
transcript NR_136884 RefSeq | MGI Sequence Detail 1743 C57BL/6  
polypeptide Q3UMU7 UniProt | EBI | MGI Sequence Detail 121 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3

    Microarray probesets 1
References
more
  • Summaries
    All 17
    Phenotypes 7
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory