Gm6494 Pseudogene Detail

Summary

• Symbol
  Gm6494
• Name
  predicted gene 6494

• Feature Type
  pseudogene
• IDs
  MGI:3644988
  NCBI Gene: 624335
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:58593192-58595293 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, 29.39 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  135 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3644988	pseudogene	Chr10:58593092-58595389 (+)
129S1/SvImJ	ENSMUSG00200029831	pseudogene	Chr10:55262136-55264433 (+)
A/J	ENSMUSG00195029232	pseudogene	Chr10:55556567-55558864 (+)
AKR/J	ENSMUSG00220043341	pseudogene	Chr10:55245170-55247467 (+)
BALB/cJ	ENSMUSG00180028476	pseudogene	Chr10:55611697-55613979 (+)
C3H/HeJ	ENSMUSG00175027278	pseudogene	Chr10:55469490-55471787 (+)
C57BL/6NJ	ENSMUSG00215031077	pseudogene	Chr10:55209758-55212055 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005030565	pseudogene	Chr10:55272609-55274906 (+)
CBA/J	ENSMUSG00210037424	pseudogene	Chr10:55347861-55350158 (+)
DBA/2J	ENSMUSG00185043505	pseudogene	Chr10:55691523-55693820 (+)
FVB/NJ	ENSMUSG00205036173	pseudogene	Chr10:55330887-55333184 (+)
JF1/MsJ	ENSUMUG00000023633	pseudogene	Chr10:56919913-56922210 (+)
LP/J	ENSMUSG00230024232	pseudogene	Chr10:57492599-57494896 (+)
NOD/ShiLtJ	ENSMUSG00190039528	pseudogene	Chr10:55675156-55677453 (+)
NZO/HlLtJ	ENSMUSG00225045825	pseudogene	Chr10:61778780-61781077 (+)
PWK/PhJ	ENSLUMG00010024569	pseudogene	Chr10:55272424-55274721 (+)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005041372	pseudogene	Chr10:55241614-55243911 (+)

Homology

• Gene Tree
  Gm6494
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  6 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm6494
• Incidental Mutations
  Mutagenetix , APF
• Find Mice (IMSR)
  3 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000112424 (Evidence)
• NCBI Gene
  624335

Representative Sequences			Length	Strain/Species
genomic	624335	NCBI Gene Model | MGI Sequence Detail	2102	C57BL/6J

References

• Summaries
  All 10

  Phenotypes 6
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
• Latest
  J:74548 Benson KF, et al., Molecular Characterization of the Mouse In(10)17Rk Inversion and Identification of a Novel Muscle-Specific Gene at the Proximal Breakpoint. Genetics. 2002 Jan;160(1):279-87