Gm7967 Gene Detail

Summary

• Symbol
  Gm7967
• Name
  predicted gene 7967

• Feature Type
  lncRNA gene
• IDs
  MGI:3644984
  NCBI Gene: 666182
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr1:98517242-98535115 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  527 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3644984	lncRNA gene	Chr1:98517162-98693618 (+)
129S1/SvImJ	ENSMUSG00200000281	lncRNA gene	Chr1:95706689-95724554 (+)
A/J	ENSMUSG00195000542	lncRNA gene	Chr1:95228081-95245953 (+)
AKR/J	ENSMUSG00220000232	lncRNA gene	Chr1:95532439-95550305 (+)
BALB/cJ	ENSMUSG00180005915	lncRNA gene	Chr1:95535929-95553801 (+)
C3H/HeJ	ENSMUSG00175005646	lncRNA gene	Chr1:95435986-95453856 (+)
C57BL/6NJ	ENSMUSG00215000395	lncRNA gene	Chr1:95424268-95442137 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005000142	lncRNA gene	Chr1:94934462-94935397 (-)
CBA/J	ENSMUSG00210000180	lncRNA gene	Chr1:95285938-95303810 (+)
DBA/2J	ENSMUSG00185014449	lncRNA gene	Chr1:99753744-99771608 (+)
FVB/NJ	ENSMUSG00205000875	lncRNA gene	Chr1:94623405-94641273 (+)
JF1/MsJ	ENSUMUG00000025349	lncRNA gene	Chr1:98482455-98497562 (+)
LP/J	ENSMUSG00230024325	lncRNA gene	Chr1:99017297-99035164 (+)
NOD/ShiLtJ	ENSMUSG00190000533	lncRNA gene	Chr1:95342343-95360207 (+)
NZO/HlLtJ	ENSMUSG00225000322	lncRNA gene	Chr1:102928604-102946472 (+)
PWK/PhJ	ENSLUMG00010006645	lncRNA gene	Chr1:94927936-94938194 (+)
SPRET/EiJ	ENSMSPG00010000918	lncRNA gene	Chr1:97040630-97050292 (+)
WSB/EiJ	ENSIUOG00005000281	lncRNA gene	Chr1:95034659-95052534 (+)

Homology

• Gene Tree
  Gm7967
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  4
• Chemically induced (other)
  1
• Endonuclease-mediated
  2
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm7967
• Find Mice (IMSR)
  1 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  5

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  42
• RefSeq
  1

• Ensembl
  ENSMUSG00000100009 (Evidence)
• NCBI Gene
  666182

Representative Sequences			Length	Strain/Species
genomic	666182	NCBI Gene Model | MGI Sequence Detail	17874	C57BL/6J
transcript	NR_166494	RefSeq | MGI Sequence Detail	646	ZRU/MplStud

Molecular
Reagents

• All nucleic 5

  cDNA 5

References

• Summaries
  All 13

  Phenotypes 5
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582