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Btf3-ps5 Pseudogene Detail
Summary
  • Symbol
    Btf3-ps5
  • Name
    basic transcription factor 3, pseudogene 5
  • Synonyms
    Gm5341
Location &
Maps
more
  • Sequence Map
    Chr7:89756688-89757176 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 50.47 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    184 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3644965
 pseudogene Chr7:89756424-89757294 (-)
129S1/SvImJ ENSMUSG00200029323
 pseudogene Chr7:76519718-76520206 (-)
A/J ENSMUSG00195042943
 pseudogene Chr7:81049997-81050482 (-)
AKR/J ENSMUSG00220044306
 pseudogene Chr7:74521046-74521531 (-)
BALB/cJ ENSMUSG00180040354
 pseudogene Chr7:77726318-77726803 (-)
C3H/HeJ ENSMUSG00175038943
 pseudogene Chr7:78414272-78414768 (-)
C57BL/6NJ ENSMUSG00215032173
 pseudogene Chr7:77592430-77592918 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0012213
 pseudogene Chr7:93182814-93183308 (-)
CAST/EiJ ENSTCUG00005032586
 pseudogene Chr7:81025550-81026038 (-)
CBA/J ENSMUSG00210044186
 pseudogene Chr7:78256201-78256697 (-)
DBA/2J ENSMUSG00185032593
 pseudogene Chr7:82585810-82586306 (-)
FVB/NJ ENSMUSG00205034751
 pseudogene Chr7:78197519-78198004 (-)
JF1/MsJ ENSUMUG00000021629
 pseudogene Chr7:87521025-87521510 (-)
LP/J ENSMUSG00230018149
 pseudogene Chr7:88675244-88675740 (-)
NOD/ShiLtJ ENSMUSG00190029513
 pseudogene Chr7:78470681-78471166 (-)
NZO/HlLtJ ENSMUSG00225011711
 pseudogene Chr7:86950046-86950542 (-)
PWK/PhJ ENSLUMG00010041123
 pseudogene Chr7:76724942-76725428 (-)
SPRET/EiJ ENSMSPG00010013129
 pseudogene Chr7:77770837-77771322 (-)
WSB/EiJ ENSIUOG00005035416
 pseudogene Chr7:78847074-78847570 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    24 phenotype references
  • All Mutations and Alleles
    4
  • Chemically induced (other)
    1
  • Radiation induced
    3
  • Genomic Mutations
    4 involving Btf3-ps5
  • Find Mice (IMSR)
    1 strains or lines available
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
Sequences &
Gene Models
less
  • All Sequences
    23
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000062235 Ensembl Gene Model | MGI Sequence Detail 489 C57BL/6J ±  kb
transcript ENSMUST00000058881 Ensembl | MGI Sequence Detail 489 Not Applicable  
For the selected sequence
Molecular
Reagents
less

  • Microarray probesets 1
Other
Accession IDs
less
MGI:6450944
References
more
  • Summaries
    All 30
    Phenotypes 24
  • Earliest
    J:141526 Russell LB, et al., Analysis of the albino-locus region of the mouse. III. Time of death of prenatal lethals. Genetics. 1979 May;92(1):205-13
  • Latest
    J:123187 Cohen-Barak O, et al., Stem cell transplantation demonstrates that Sox6 represses epsilon y globin expression in definitive erythropoiesis of adult mice. Exp Hematol. 2007 Mar;35(3):358-67
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/15/2026
MGI 6.29 		The Jackson Laboratory