Rpl7a-ps4 Pseudogene Detail

Summary

• Symbol
  Rpl7a-ps4
• Name
  ribosomal protein 7A, pseudogene 4
• Synonyms
  Gm6965

• Feature Type
  pseudogene
• IDs
  MGI:3644959
  NCBI Gene: 629342
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr16:57717169-57717960 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, 34.30 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  86 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3644959	pseudogene	Chr16:57717124-57717979 (-)
129S1/SvImJ	ENSMUSG00200021480	pseudogene	Chr16:54629905-54630696 (-)
A/J	ENSMUSG00195025896	pseudogene	Chr16:54260550-54261341 (-)
AKR/J	ENSMUSG00220019989	pseudogene	Chr16:54617605-54618396 (-)
BALB/cJ	ENSMUSG00180025278	pseudogene	Chr16:54432424-54433215 (-)
C3H/HeJ	ENSMUSG00175018025	pseudogene	Chr16:54709059-54709850 (-)
C57BL/6NJ	ENSMUSG00215022845	pseudogene	Chr16:54523632-54524423 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005014593	pseudogene	Chr16:54723547-54724338 (-)
CBA/J	ENSMUSG00210019817	pseudogene	Chr16:54717623-54718414 (-)
DBA/2J	ENSMUSG00185025814	pseudogene	Chr16:54609918-54610709 (-)
FVB/NJ	ENSMUSG00205010763	pseudogene	Chr16:54385379-54386170 (-)
JF1/MsJ	ENSUMUG00000026969	pseudogene	Chr16:54830307-54831098 (-)
LP/J	ENSMUSG00230008859	pseudogene	Chr16:57150787-57151578 (-)
NOD/ShiLtJ	ENSMUSG00190007531	pseudogene	Chr16:54631281-54632072 (-)
NZO/HlLtJ	ENSMUSG00225026317	pseudogene	Chr16:60252687-60253478 (-)
PWK/PhJ	ENSLUMG00010012075	pseudogene	Chr16:54634538-54635329 (-)
SPRET/EiJ	ENSMSPG00010001701	pseudogene	Chr16:55161058-55161849 (-)
WSB/EiJ	ENSIUOG00005009458	pseudogene	Chr16:54831752-54832543 (-)

Homology

• Gene Tree
  Rpl7a-ps4
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000116630 (Evidence)
• NCBI Gene
  629342

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000116630	Ensembl Gene Model | MGI Sequence Detail	792	C57BL/6J
transcript	ENSMUST00000231763	Ensembl | MGI Sequence Detail	792	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;