Gm7443 Pseudogene Detail

Summary

• Symbol
  Gm7443
• Name
  predicted gene 7443

• Feature Type
  pseudogene
• IDs
  MGI:3644945
  NCBI Gene: 115490417
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr6:83769584-83769961 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, 35.96 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  122 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3644945	pseudogene	Chr6:83769541-83770014 (-)
129S1/SvImJ	ENSMUSG00200012631	pseudogene	Chr6:80738580-80738957 (-)
A/J	ENSMUSG00195012380	pseudogene	Chr6:80417725-80418102 (-)
AKR/J	ENSMUSG00220002250	pseudogene	Chr6:79367656-79368033 (-)
BALB/cJ	ENSMUSG00180010154	pseudogene	Chr6:80793768-80794145 (-)
C3H/HeJ	ENSMUSG00175043760	pseudogene	Chr6:96617813-96618190 (+)
C57BL/6NJ	ENSMUSG00215016368	pseudogene	Chr6:80789349-80789726 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011964	pseudogene	Chr6:79962079-79962471 (-)
CAST/EiJ	ENSTCUG00005008317	pseudogene	Chr6:80796062-80796439 (-)
CBA/J	ENSMUSG00210011290	pseudogene	Chr6:80607555-80607932 (-)
DBA/2J	ENSMUSG00185044328	pseudogene	Chr6:81154722-81155099 (-)
FVB/NJ	ENSMUSG00205026564	pseudogene	Chr6:79835386-79835763 (-)
JF1/MsJ	ENSUMUG00000022192	pseudogene	Chr6:80215708-80216085 (-)
LP/J	ENSMUSG00230050621	pseudogene	Chr6:82295803-82296180 (-)
NOD/ShiLtJ	ENSMUSG00190001850	pseudogene	Chr6:80238487-80238864 (-)
NZO/HlLtJ	ENSMUSG00225021510	pseudogene	Chr6:84214284-84214661 (-)
PWK/PhJ	ENSLUMG00010006292	pseudogene	Chr6:79562494-79562871 (-)
SPRET/EiJ	ENSMSPG00010044487	pseudogene	Chr6:81691799-81692176 (-)
WSB/EiJ	ENSIUOG00005018649	pseudogene	Chr6:81172528-81172905 (-)

Homology

• Gene Tree
  Gm7443
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Endonuclease-mediated
  1
• Genomic Mutations
  1 involving Gm7443
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000108525 (Evidence)
• NCBI Gene
  115490417

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000108525	Ensembl Gene Model | MGI Sequence Detail	378	C57BL/6J
transcript	ENSMUST00000206355	Ensembl | MGI Sequence Detail	378	Not Applicable

References

• Summaries
  All 6

  Phenotypes 1
• Earliest
  J:235276 Saito M, et al., Identification of Stmm3 locus conferring resistance to late-stage chemically induced skin papillomas on mouse chromosome 4 by congenic mapping and allele-specific alteration analysis. Exp Anim. 2014;63(3):339-48