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Gm5898 Pseudogene Detail
Summary
  • Symbol
    Gm5898
  • Name
    predicted gene 5898
Location &
Maps
more
  • Sequence Map
    Chr7:63192227-63194297 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 34.53 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    212 from dbSNP Build 142
  • Strain Annotations
    20
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3644921
 pseudogene Chr7:63192227-63195599 (+)
129S1/SvImJ ENSMUSG00200009053
 pseudogene Chr7:49958465-49959075 (+)
A/J ENSMUSG00195013563
 pseudogene Chr7:54347961-54350031 (+)
AKR/J ENSMUSG00220011642
 pseudogene Chr7:47884271-47884881 (+)
BALB/cJ ENSMUSG00180005199
 pseudogene Chr7:51081144-51081754 (+)
C3H/HeJ ENSMUSG00175011126
 pseudogene Chr7:51828919-51829529 (+)
C57BL/6NJ ENSMUSG00215026782
 pseudogene Chr7:50985814-50987884 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0010729
 pseudogene Chr3:3820017-3821863 (-)
CAST/EiJ ENSTCUG00005012260
 pseudogene Chr7:54566046-54566103 (+)
CBA/J ENSMUSG00210020173
 pseudogene Chr7:51725108-51725718 (+)
DBA/2J ENSMUSG00185006797
 pseudogene Chr7:56052748-56052805 (+)
FVB/NJ ENSMUSG00205005169
 pseudogene Chr7:51648077-51650147 (+)
JF1/MsJ ENSUMUG00000010555
 pseudogene Chr7:60798540-60798597 (+)
LP/J ENSMUSG00230020781
 pseudogene Chr7:62060178-62062248 (+)
NOD/ShiLtJ ENSMUSG00190007431
 pseudogene Chr7:51833860-51834470 (+)
NZO/HlLtJ ENSMUSG00225010682
 pseudogene Chr7:60372407-60373017 (+)
PWK/PhJ ENSLUMG00010002526
 pseudogene Chr7:50345217-50345827 (+)
SPRET/EiJ ENSMSPG00010003866
 pseudogene Chr7:50712099-50712156 (+)
WSB/EiJ ENSIUOG00005005856
 pseudogene Chr7:52245966-52248038 (+)
WSB/EiJ ENSIUOG00005017420
 pseudogene Chr13:29366405-29368442 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    11 phenotype references
  • All Mutations and Alleles
    5
  • Chemically induced (other)
    1
  • Endonuclease-mediated
    1
  • Radiation induced
    1
  • Targeted
    2
  • Genomic Mutations
    5 involving Gm5898
  • Find Mice (IMSR)
    0 strains or lines available
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
Sequences &
Gene Models
less
  • All Sequences
    24
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000081788 Ensembl Gene Model | MGI Sequence Detail 2071 C57BL/6J ±  kb
transcript ENSMUST00000121016 Ensembl | MGI Sequence Detail 2071 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 16
    Phenotypes 11
  • Earliest
    J:88307 Giometti CS, et al., The analysis of recessive lethal mutations in mice by using two-dimensional gel electrophoresis of liver proteins. Mutat Res. 1990 Sep;242(1):47-55
  • Latest
    J:123187 Cohen-Barak O, et al., Stem cell transplantation demonstrates that Sox6 represses epsilon y globin expression in definitive erythropoiesis of adult mice. Exp Hematol. 2007 Mar;35(3):358-67
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/15/2026
MGI 6.29 		The Jackson Laboratory