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Gm6623 Pseudogene Detail
Summary
  • Symbol
    Gm6623
  • Name
    predicted gene 6623
  • Feature Type
    pseudogene
  • IDs
    MGI:3644901
    NCBI Gene: 625785
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr17:36490006-36490549 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 17, 18.98 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    4 from dbSNP Build 142
  • Strain Annotations
    12
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3644901
 pseudogene Chr17:36489669-36492256 (+)
129S1/SvImJ no annotation
A/J MGP_AJ_G0011335
 pseudogene Chr17:35287960-35288503 (+)
AKR/J MGP_AKRJ_G0011299
 pseudogene Chr17:35714511-35715054 (+)
BALB/cJ MGP_BALBcJ_G0011312
 pseudogene Chr17:35453347-35453890 (+)
C3H/HeJ MGP_C3HHeJ_G0011200
 pseudogene Chr17:36209812-36210355 (+)
C57BL/6NJ MGP_C57BL6NJ_G0011603
 pseudogene Chr17:37939506-37940049 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0010170
 pseudogene Chr17:32903081-32903631 (+)
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0011180
 pseudogene Chr17:39499844-39500388 (+)
DBA/2J MGP_DBA2J_G0011232
 pseudogene Chr17:34593567-34594111 (+)
FVB/NJ MGP_FVBNJ_G0011233
 pseudogene Chr17:34355091-34355634 (+)
LP/J no annotation
NOD/ShiLtJ MGP_NODShiLtJ_G0011228
 pseudogene Chr17:38284538-38285081 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0011580
 pseudogene Chr17:36010003-36010547 (+)
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    1
Sequences &
Gene Models
less
  • All Sequences
    17
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000092374 Ensembl Gene Model | MGI Sequence Detail 544 C57BL/6J ±  kb
transcript ENSMUST00000173570 Ensembl | MGI Sequence Detail 544 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1
References
more
  • Summaries
    All 8
    Phenotypes 3
  • Earliest
    J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9
  • Latest
    J:190754 Ermakova O, et al., Construction and phenotypic analysis of mice carrying a duplication of the major histocompatibility class I (MHC-I) locus. Mamm Genome. 2012 Aug;23(7-8):443-53
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/09/2024
MGI 6.23 		The Jackson Laboratory