Gm8325 Pseudogene Detail

Summary

• Symbol
  Gm8325
• Name
  predicted pseudogene 8325

• Feature Type
  pseudogene
• IDs
  MGI:3644852
  NCBI Gene: 666853
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr3:60784446-60785008 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, 29.17 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  73 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3644852	pseudogene	Chr3:60784420-60786265 (+)
129S1/SvImJ	ENSMUSG00200023538	pseudogene	Chr3:57707438-57707444 (+)
A/J	ENSMUSG00195032859	pseudogene	Chr3:57638802-57638808 (+)
AKR/J	ENSMUSG00220032095	pseudogene	Chr3:59016455-59016461 (-)
BALB/cJ	ENSMUSG00180027545	pseudogene	Chr3:57708824-57708830 (+)
C3H/HeJ	ENSMUSG00175008791	pseudogene	Chr3:57568232-57568238 (+)
C57BL/6NJ	ENSMUSG00215009916	pseudogene	Chr3:57978950-57980809 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005002395	pseudogene	Chr3:57316140-57317999 (+)
CAST/EiJ	ENSTCUG00005046994	pseudogene	Chr7:72800097-72801819 (-)
CBA/J	ENSMUSG00210003735	pseudogene	Chr3:57672858-57672864 (+)
DBA/2J	ENSMUSG00185028162	pseudogene	Chr3:57802043-57803902 (+)
FVB/NJ	ENSMUSG00205003783	pseudogene	Chr3:56815418-56815424 (+)
JF1/MsJ	ENSUMUG00000003669	pseudogene	Chr3:57553759-57553765 (+)
LP/J	ENSMUSG00230004937	pseudogene	Chr3:59845635-59845641 (+)
NOD/ShiLtJ	ENSMUSG00190034733	pseudogene	Chr3:58070540-58070546 (+)
NZO/HlLtJ	ENSMUSG00225002383	pseudogene	Chr3:62430830-62430836 (+)
PWK/PhJ	ENSLUMG00010005387	pseudogene	Chr3:57363589-57363595 (+)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005008966	pseudogene	Chr3:57798054-57798060 (+)

Homology

• Gene Tree
  Gm8325
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  1
• Radiation induced
  1
• Targeted
  1
• Genomic Mutations
  2 involving Gm8325
• Incidental Mutations
  Mutagenetix , APF
• Find Mice (IMSR)
  2 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000027694 (Evidence)
• NCBI Gene
  666853

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000027694	Ensembl Gene Model | MGI Sequence Detail	563	C57BL/6J
transcript	ENSMUST00000099086	Ensembl | MGI Sequence Detail	453	Not Applicable

References

• Summaries
  All 10

  Diseases 1

  Phenotypes 5
• Earliest
  J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
• Latest
  J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426

TSS for Gm8325:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr29330	Chr3:60784423-60784438 (+)	-15 bp