Rpl19-ps5 Pseudogene Detail

Summary

• Symbol
  Rpl19-ps5
• Name
  ribosomal protein L19, pseudogene 5
• Synonyms
  Gm9389

• Feature Type
  pseudogene
• IDs
  MGI:3644768
  NCBI Gene: 668835
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr14:120950490-120951078 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, 64.74 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  172 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3644768	pseudogene	Chr14:120950466-120951157 (+)
129S1/SvImJ	ENSMUSG00200025241	pseudogene	Chr14:109840804-109841392 (+)
A/J	ENSMUSG00195031578	pseudogene	Chr14:109586297-109586885 (+)
AKR/J	ENSMUSG00220007897	pseudogene	Chr14:109393618-109394206 (+)
BALB/cJ	ENSMUSG00180028462	pseudogene	Chr14:109078199-109078787 (+)
C3H/HeJ	ENSMUSG00175005892	pseudogene	Chr14:111002376-111002964 (+)
C57BL/6NJ	ENSMUSG00215028074	pseudogene	Chr14:109217413-109218001 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005007390	pseudogene	Chr14:110635202-110635790 (+)
CBA/J	ENSMUSG00210027354	pseudogene	Chr14:109963432-109964020 (+)
DBA/2J	ENSMUSG00185014058	pseudogene	Chr14:115124319-115124907 (+)
FVB/NJ	ENSMUSG00205008207	pseudogene	Chr14:108672004-108672592 (+)
JF1/MsJ	ENSUMUG00000030524	pseudogene	Chr14:126147518-126148107 (+)
LP/J	ENSMUSG00230012758	pseudogene	Chr14:127095804-127096392 (+)
NOD/ShiLtJ	ENSMUSG00190025660	pseudogene	Chr14:109797192-109797780 (+)
NZO/HlLtJ	ENSMUSG00225029375	pseudogene	Chr14:117161582-117162171 (+)
PWK/PhJ	ENSLUMG00010029741	pseudogene	Chr14:109066876-109067465 (+)
SPRET/EiJ	ENSMSPG00010014947	pseudogene	Chr14:113349459-113350047 (+)
WSB/EiJ	ENSIUOG00005031399	pseudogene	Chr14:108998921-108999509 (+)

Homology

• Gene Tree
  Rpl19-ps5
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Rpl19-ps5
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000115630 (Evidence)
• NCBI Gene
  668835

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000115630	Ensembl Gene Model | MGI Sequence Detail	589	C57BL/6J
transcript	ENSMUST00000226406	Ensembl | MGI Sequence Detail	589	Not Applicable

References

• Summaries
  All 8

  Phenotypes 4
• Earliest
  J:67314 Roix J, et al., Molecular and functional mapping of the piebald deletion complex on mouse chromosome 14. Genetics. 2001 Feb;157(2):803-15