Gm16407 Pseudogene Detail

Summary

• Symbol
  Gm16407
• Name
  predicted pseudogene 16407

• Feature Type
  pseudogene
• IDs
  MGI:3644720
  NCBI Gene: 100040304
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  ChrX:69444103-69444669 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 36.03 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  88 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3644720	pseudogene	ChrX:69443938-69445928 (+)
129S1/SvImJ	ENSMUSG00200042960	pseudogene	ChrX:51571590-51572156 (+)
A/J	ENSMUSG00195035489	pseudogene	ChrX:55184908-55185474 (+)
AKR/J	ENSMUSG00220047446	pseudogene	ChrX:50487710-50488276 (+)
BALB/cJ	ENSMUSG00180049835	pseudogene	ChrX:51784568-51785134 (+)
C3H/HeJ	ENSMUSG00175035082	pseudogene	ChrX:55353519-55354085 (+)
C57BL/6NJ	ENSMUSG00215041649	pseudogene	ChrX:51837695-51838261 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009753	pseudogene	Chr12:5507631-5510014 (+)
CAST/EiJ	ENSTCUG00005043034	pseudogene	ChrX:53370308-53370874 (+)
CBA/J	ENSMUSG00210044352	pseudogene	ChrX:52025112-52025678 (+)
DBA/2J	ENSMUSG00185036872	pseudogene	ChrX:64474001-64474567 (+)
FVB/NJ	ENSMUSG00205040456	pseudogene	ChrX:51589880-51590446 (+)
JF1/MsJ	ENSUMUG00000048701	pseudogene	ChrX:85339592-85340158 (+)
LP/J	ENSMUSG00230037477	pseudogene	ChrX:71029875-71030441 (+)
NOD/ShiLtJ	ENSMUSG00190043463	pseudogene	ChrX:51285101-51285667 (+)
NZO/HlLtJ	ENSMUSG00225049387	pseudogene	ChrX:76234108-76234674 (+)
PWK/PhJ	ENSLUMG00010047031	pseudogene	ChrX:51195075-51195641 (+)
SPRET/EiJ	ENSMSPG00010039059	pseudogene	ChrX:54180309-54180828 (+)
WSB/EiJ	ENSIUOG00005049744	pseudogene	ChrX:52252750-52253316 (+)

Homology

• Gene Tree
  Gm16407
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000081199 (Evidence)
• NCBI Gene
  100040304

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000081199	Ensembl Gene Model | MGI Sequence Detail	567	C57BL/6J
transcript	ENSMUST00000122134	Ensembl | MGI Sequence Detail	567	Not Applicable

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;