Rpl7-ps7 Pseudogene Detail

Summary

• Symbol
  Rpl7-ps7
• Name
  ribosomal protein L7, pseudogene 7
• Synonyms
  Gm5557

• Feature Type
  pseudogene
• IDs
  MGI:3644615
  NCBI Gene: 433912
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr5:82484698-82485496 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, 42.94 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  123 from dbSNP Build 142
• Strain Annotations
  25

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3644615	pseudogene	Chr5:82484694-82485564 (+)
129S1/SvImJ	ENSMUSG00200001170	pseudogene	Chr5:78201143-78201941 (+)
A/J	ENSMUSG00195045594	pseudogene	Chr1:33466861-33467659 (+)
A/J	ENSMUSG00195043032	pseudogene	Chr5:17623710-17624508 (+)
A/J	ENSMUSG00195011037	pseudogene	Chr5:77383989-77384787 (+)
AKR/J	ENSMUSG00220040212	pseudogene	Chr5:17655643-17656441 (+)
AKR/J	ENSMUSG00220014978	pseudogene	Chr5:77558890-77559688 (+)
BALB/cJ	ENSMUSG00180000092	pseudogene	Chr5:77242868-77243666 (+)
C3H/HeJ	ENSMUSG00175001653	pseudogene	Chr1:33471000-33471798 (+)
C3H/HeJ	ENSMUSG00175004223	pseudogene	Chr5:79322957-79323755 (+)
C3H/HeJ	ENSMUSG00175028962	pseudogene	Chr5:19429222-19430020 (+)
C57BL/6NJ	ENSMUSG00215000462	pseudogene	Chr5:78077186-78077984 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005013916	pseudogene	Chr5:76926603-76927401 (+)
CBA/J	ENSMUSG00210005899	pseudogene	Chr5:18468622-18469420 (+)
CBA/J	ENSMUSG00210000801	pseudogene	Chr5:78121749-78122547 (+)
DBA/2J	ENSMUSG00185016883	pseudogene	Chr5:80066112-80066910 (+)
FVB/NJ	ENSMUSG00205001150	pseudogene	Chr5:76997907-76998705 (+)
JF1/MsJ	ENSUMUG00000001055	pseudogene	Chr5:84437746-84438544 (+)
LP/J	ENSMUSG00230001964	pseudogene	Chr5:84755874-84756672 (+)
NOD/ShiLtJ	ENSMUSG00190007717	pseudogene	Chr5:77003444-77004242 (+)
NZO/HlLtJ	ENSMUSG00225034756	pseudogene	Chr5:89791554-89792352 (+)
PWK/PhJ	ENSLUMG00010007697	pseudogene	Chr5:76943871-76944669 (+)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005004444	pseudogene	Chr6:887823-888621 (+)
WSB/EiJ	ENSIUOG00005041553	pseudogene	Chr1:33462487-33463285 (+)
WSB/EiJ	ENSIUOG00005018297	pseudogene	Chr5:79969733-79970531 (+)

Homology

• Gene Tree
  Rpl7-ps7
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  6 phenotype references
  

• All Mutations and Alleles
  4
• Chemically induced (other)
  2
• Radiation induced
  1
• Spontaneous
  1
• Genomic Mutations
  4 involving Rpl7-ps7
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  29
• RefSeq
  1

• Ensembl
  ENSMUSG00000106926 (Evidence)
• NCBI Gene
  433912

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000106926	Ensembl Gene Model | MGI Sequence Detail	799	C57BL/6J
transcript	ENSMUST00000200912	Ensembl | MGI Sequence Detail	799	Not Applicable

References

• Summaries
  All 10

  Phenotypes 6
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17