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Igkv12-47 Pseudogene Detail
Summary
  • Symbol
    Igkv12-47
  • Name
    immunoglobulin kappa variable 12-47
  • Synonyms
    Gm5574
  • Feature Type
    pseudogenic gene segment
  • IDs
    MGI:3644595
    NCBI Gene: 434037
  • Alliance
    genome feature page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr6:69727838-69728294 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, 31.60 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    229 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3644595
 pseudogenic gene segment Chr6:69727838-69728315 (-)
129S1/SvImJ ENSMUSG00200012062
 pseudogenic gene segment Chr6:66634330-66634807 (-)
A/J ENSMUSG00195044658
 pseudogenic gene segment Chr6:66387255-66387732 (-)
AKR/J ENSMUSG00220047001
 pseudogenic gene segment Chr6:65441519-65441996 (-)
BALB/cJ ENSMUSG00180038623
 pseudogenic gene segment Chr6:66743124-66743601 (-)
C3H/HeJ ENSMUSG00175013558
 pseudogenic gene segment Chr6:110706711-110707188 (+)
C57BL/6NJ ENSMUSG00215043659
 pseudogenic gene segment Chr6:66717683-66718160 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0000119
 pseudogenic gene segment Chr6:66733372-66733833 (-)
CAST/EiJ ENSTCUG00005036425
 pseudogenic gene segment Chr6:66906126-66906603 (-)
CBA/J ENSMUSG00210040580
 pseudogenic gene segment Chr6:66540494-66540971 (-)
DBA/2J ENSMUSG00185043307
 pseudogenic gene segment Chr6:67105711-67106188 (-)
FVB/NJ ENSMUSG00205034135
 pseudogenic gene segment Chr6:66084167-66084644 (-)
JF1/MsJ ENSUMUG00000045786
 pseudogenic gene segment Chr6:66111002-66111479 (-)
LP/J ENSMUSG00230028746
 pseudogenic gene segment Chr6:68226013-68226490 (-)
NOD/ShiLtJ ENSMUSG00190044110
 pseudogenic gene segment Chr6:66051774-66052251 (-)
NZO/HlLtJ ENSMUSG00225020442
 pseudogenic gene segment Chr6:70199892-70200369 (-)
PWK/PhJ ENSLUMG00010021211
 pseudogenic gene segment Chr6:65534047-65534524 (-)
SPRET/EiJ ENSMSPG00010026766
 pseudogenic gene segment Chr6:67557238-67557715 (-)
WSB/EiJ ENSIUOG00005025404
 pseudogenic gene segment Chr6:67417886-67418361 (-)



Homology
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
Sequences &
Gene Models
less
  • All Sequences
    23
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 434037 NCBI Gene Model | MGI Sequence Detail 457 C57BL/6J ±  kb
For the selected sequence
References
more
  • Summaries
    All 6
  • Earliest
    J:164271 Arnhold J, et al., Human myeloperoxidase in innate and acquired immunity. Arch Biochem Biophys. 2010 Aug 1;500(1):92-106
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory