Gm4928 Pseudogene Detail

Summary

• Symbol
  Gm4928
• Name
  predicted gene 4928

• Feature Type
  pseudogene
• IDs
  MGI:3644549
  NCBI Gene: 238074
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr12:10773657-10774506 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, 5.48 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  190 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3644549	pseudogene	Chr12:10773305-10774587 (-)
129S1/SvImJ	ENSMUSG00200024399	pseudogene	Chr12:7761971-7762826 (-)
A/J	ENSMUSG00195016515	pseudogene	Chr12:7803570-7804434 (-)
AKR/J	ENSMUSG00220032445	pseudogene	Chr12:7833595-7834459 (-)
BALB/cJ	ENSMUSG00180016012	pseudogene	Chr12:7796042-7796903 (-)
C3H/HeJ	ENSMUSG00175009868	pseudogene	Chr12:7786397-7787261 (-)
C57BL/6NJ	ENSMUSG00215020878	pseudogene	Chr12:7614729-7615578 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005023456	pseudogene	Chr12:7462310-7463154 (-)
CBA/J	ENSMUSG00210013705	pseudogene	Chr12:7817012-7817876 (-)
DBA/2J	ENSMUSG00185021896	pseudogene	Chr12:7791431-7792295 (-)
FVB/NJ	ENSMUSG00205003342	pseudogene	Chr12:7518433-7519297 (-)
JF1/MsJ	ENSUMUG00000041756	pseudogene	Chr12:7719253-7720110 (-)
LP/J	ENSMUSG00230012318	pseudogene	Chr12:9589141-9590008 (-)
NOD/ShiLtJ	ENSMUSG00190008151	pseudogene	Chr12:9042973-9043840 (-)
NZO/HlLtJ	ENSMUSG00225029917	pseudogene	Chr12:11693159-11694023 (-)
PWK/PhJ	ENSLUMG00010017011	pseudogene	Chr12:7467557-7468417 (-)
SPRET/EiJ	ENSMSPG00010005113	pseudogene	Chr12:8226523-8227360 (-)
WSB/EiJ	ENSIUOG00005002376	pseudogene	Chr12:7822105-7822963 (-)

Homology

• Gene Tree
  Gm4928
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Gene trapped
  1
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000112515 (Evidence)
• NCBI Gene
  238074

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000112515	Ensembl Gene Model | MGI Sequence Detail	850	C57BL/6J
transcript	ENSMUST00000219622	Ensembl | MGI Sequence Detail	850	Not Applicable

References

• Summaries
  All 6

  Phenotypes 2
• Earliest
  J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14

TSS for Gm4928:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr115726	Chr12:10774094-10774119 (-)	399 bp