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Gm5599 Pseudogene Detail
Summary
  • Symbol
    Gm5599
  • Name
    predicted gene 5599
Location &
Maps
more
  • Sequence Map
    Chr7:112571303-112572090 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 59.13 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    113 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3644531
 pseudogene Chr7:112571258-112572103 (-)
129S1/SvImJ ENSMUSG00200034891
 pseudogene Chr7:99113159-99113946 (-)
A/J ENSMUSG00195040605
 pseudogene Chr7:103616891-103617678 (-)
AKR/J ENSMUSG00220039194
 pseudogene Chr7:97019792-97020579 (-)
BALB/cJ ENSMUSG00180046417
 pseudogene Chr7:100284974-100285761 (-)
C3H/HeJ ENSMUSG00175025389
 pseudogene Chr7:100920776-100921556 (-)
C57BL/6NJ ENSMUSG00215051463
 pseudogene Chr7:100230707-100231494 (-)
CAROLI/EiJ no annotation
CAST/EiJ ENSTCUG00005044449
 pseudogene Chr7:103619496-103620283 (-)
CBA/J ENSMUSG00210048170
 pseudogene Chr7:100747726-100748506 (-)
DBA/2J ENSMUSG00185022951
 pseudogene Chr7:105097919-105098699 (-)
FVB/NJ ENSMUSG00205050006
 pseudogene Chr7:100711012-100711799 (-)
JF1/MsJ ENSUMUG00000052139
 pseudogene Chr7:110124957-110125737 (-)
LP/J ENSMUSG00230038524
 pseudogene Chr7:111198830-111199617 (-)
NOD/ShiLtJ ENSMUSG00190047540
 pseudogene Chr7:100909281-100910068 (-)
NZO/HlLtJ ENSMUSG00225019509
 pseudogene Chr7:109431492-109432272 (-)
PWK/PhJ ENSLUMG00010041786
 pseudogene Chr7:99261177-99261964 (-)
SPRET/EiJ ENSMSPG00010044672
 pseudogene Chr7:100431824-100432611 (-)
WSB/EiJ ENSIUOG00005012465
 pseudogene Chr7:101567274-101568061 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
Sequences &
Gene Models
less
  • All Sequences
    22
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000110109 Ensembl Gene Model | MGI Sequence Detail 788 C57BL/6J ±  kb
transcript ENSMUST00000209602 Ensembl | MGI Sequence Detail 788 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 10
    Phenotypes 6
  • Earliest
    J:61682 Hagiwara N, et al., Sox6 is a candidate gene for p100H myopathy, heart block, and sudden neonatal death. Proc Natl Acad Sci U S A. 2000 Apr 11;97(8):4180-5
  • Latest
    J:123187 Cohen-Barak O, et al., Stem cell transplantation demonstrates that Sox6 represses epsilon y globin expression in definitive erythropoiesis of adult mice. Exp Hematol. 2007 Mar;35(3):358-67
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/15/2026
MGI 6.29 		The Jackson Laboratory