Gm7434 Pseudogene Detail

Summary

• Symbol
  Gm7434
• Name
  predicted gene 7434

• Feature Type
  pseudogene
• IDs
  MGI:3644530
  NCBI Gene: 664977
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr8:4441726-4442133 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, 2.02 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  86 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3644530	pseudogene	Chr8:4418797-4442148 (+)
129S1/SvImJ	ENSMUSG00200012716	pseudogene	Chr8:1267111-1267518 (+)
A/J	ENSMUSG00195011557	pseudogene	Chr8:1667067-1667474 (+)
AKR/J	no annotation
BALB/cJ	ENSMUSG00180005174	pseudogene	Chr8:1319035-1319442 (+)
C3H/HeJ	ENSMUSG00175008625	pseudogene	Chr8:1432128-1432535 (+)
C57BL/6NJ	ENSMUSG00215008941	pseudogene	Chr8:1351149-1351556 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005020868	pseudogene	Chr8:1369814-1370221 (+)
CBA/J	ENSMUSG00210010938	pseudogene	Chr8:1309644-1310051 (+)
DBA/2J	ENSMUSG00185004312	pseudogene	Chr8:1445696-1446103 (+)
FVB/NJ	ENSMUSG00205005589	pseudogene	Chr8:1373871-1374278 (+)
JF1/MsJ	ENSUMUG00000048037	pseudogene	Chr8:1404191-1404598 (+)
LP/J	ENSMUSG00230007981	pseudogene	Chr8:3615245-3615652 (+)
NOD/ShiLtJ	ENSMUSG00190012204	pseudogene	Chr8:1419736-1420143 (+)
NZO/HlLtJ	ENSMUSG00225019776	pseudogene	Chr8:11472925-11473332 (+)
PWK/PhJ	ENSLUMG00010010961	pseudogene	Chr8:1329448-1329855 (+)
SPRET/EiJ	ENSMSPG00010018890	pseudogene	Chr8:1271350-1271757 (+)
WSB/EiJ	ENSIUOG00005004984	pseudogene	Chr8:1357068-1357475 (+)

Homology

• Gene Tree
  Gm7434
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000109241 (Evidence)
• NCBI Gene
  664977

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000109241	Ensembl Gene Model | MGI Sequence Detail	408	C57BL/6J
transcript	ENSMUST00000208558	Ensembl | MGI Sequence Detail	408	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm7434:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr76123	Chr8:4441673-4441675 (+)	-52 bp