Gm5402 Pseudogene Detail

Summary

• Symbol
  Gm5402
• Name
  predicted gene 5402

• Feature Type
  pseudogene
• IDs
  MGI:3644522
  NCBI Gene: 385500
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  ChrX:93715109-93716726 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 41.65 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  100 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3644522	pseudogene	ChrX:93715106-93716736 (-)
129S1/SvImJ	ENSMUSG00200038707	pseudogene	ChrX:75488209-75489826 (-)
A/J	ENSMUSG00195032894	pseudogene	ChrX:79284829-79286446 (-)
AKR/J	ENSMUSG00220030042	pseudogene	ChrX:74016238-74017855 (-)
BALB/cJ	ENSMUSG00180023255	pseudogene	ChrX:75923663-75925280 (-)
C3H/HeJ	ENSMUSG00175019412	pseudogene	ChrX:79646894-79648511 (-)
C57BL/6NJ	ENSMUSG00215021769	pseudogene	ChrX:76169816-76171433 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005029264	pseudogene	ChrX:77174239-77175856 (-)
CBA/J	ENSMUSG00210036304	pseudogene	ChrX:76356932-76358549 (-)
DBA/2J	ENSMUSG00185033059	pseudogene	ChrX:88635460-88637077 (-)
FVB/NJ	ENSMUSG00205025876	pseudogene	ChrX:75653578-75655195 (-)
JF1/MsJ	ENSUMUG00000023607	pseudogene	ChrX:109476506-109478123 (-)
LP/J	ENSMUSG00230014052	pseudogene	ChrX:95333590-95335207 (-)
NOD/ShiLtJ	ENSMUSG00190018311	pseudogene	ChrX:75532862-75534479 (-)
NZO/HlLtJ	ENSMUSG00225045699	pseudogene	ChrX:100477608-100479225 (-)
PWK/PhJ	ENSLUMG00010040125	pseudogene	ChrX:74815269-74816886 (-)
SPRET/EiJ	ENSMSPG00010034183	pseudogene	ChrX:78869402-78870184 (-)
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm5402
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000083438 (Evidence)
• NCBI Gene
  385500

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000083438	Ensembl Gene Model | MGI Sequence Detail	1618	C57BL/6J
transcript	ENSMUST00000119588	Ensembl | MGI Sequence Detail	1618	Not Applicable

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;