Gm5093 Pseudogene Detail

Summary

• Symbol
  Gm5093
• Name
  predicted gene 5093

• Feature Type
  pseudogene
• IDs
  MGI:3644404
  NCBI Gene: 328825
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr17:46750504-46751023 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, 22.90 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  99 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3644404	pseudogene	Chr17:46750461-46751041 (-)
129S1/SvImJ	ENSMUSG00200028108	pseudogene	Chr17:41949982-41950513 (-)
A/J	ENSMUSG00195023024	pseudogene	Chr17:43453912-43454431 (-)
AKR/J	ENSMUSG00220037213	pseudogene	Chr17:42447819-42448338 (-)
BALB/cJ	ENSMUSG00180025579	pseudogene	Chr17:43204135-43204654 (-)
C3H/HeJ	ENSMUSG00175016296	pseudogene	Chr17:42518038-42518557 (-)
C57BL/6NJ	ENSMUSG00215036832	pseudogene	Chr17:42073336-42073855 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005025540	pseudogene	Chr17:43235574-43236105 (-)
CBA/J	ENSMUSG00210039732	pseudogene	Chr17:42267765-42268284 (-)
DBA/2J	ENSMUSG00185030602	pseudogene	Chr17:45173123-45173642 (-)
FVB/NJ	ENSMUSG00205052719	pseudogene	Chr17:42743649-42744168 (-)
JF1/MsJ	ENSUMUG00000036277	pseudogene	Chr17:44792139-44792658 (-)
LP/J	ENSMUSG00230041537	pseudogene	Chr17:46064862-46065381 (-)
NOD/ShiLtJ	ENSMUSG00190018124	pseudogene	Chr17:42155979-42156498 (-)
NZO/HlLtJ	ENSMUSG00225043745	pseudogene	Chr17:48320601-48321120 (-)
PWK/PhJ	ENSLUMG00010037070	pseudogene	Chr17:42029159-42029678 (-)
SPRET/EiJ	ENSMSPG00010040080	pseudogene	Chr17:42231187-42231717 (-)
WSB/EiJ	ENSIUOG00005028223	pseudogene	Chr17:43116647-43117166 (-)

Homology

• Gene Tree
  Gm5093
  

Mutations,
Alleles, and
Phenotypes

• Incidental Mutations
  Mutagenetix , APF
• Find Mice (IMSR)
  9 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000091742 (Evidence)
• NCBI Gene
  328825

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000091742	Ensembl Gene Model | MGI Sequence Detail	520	C57BL/6J
transcript	ENSMUST00000166852	Ensembl | MGI Sequence Detail	520	Not Applicable

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for Gm5093:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr148325	Chr17:46751042-46751051 (-)	-24 bp