Gm6011 Pseudogene Detail

Summary

• Symbol
  Gm6011
• Name
  predicted gene 6011

• Feature Type
  pseudogene
• IDs
  MGI:3644337
  NCBI Gene: 547011
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr8:44175310-44177102 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, 24.11 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  182 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3644337	pseudogene	Chr8:44175306-44177102 (-)
129S1/SvImJ	ENSMUSG00200008101	pseudogene	Chr8:39291130-39292925 (-)
A/J	ENSMUSG00195006075	pseudogene	Chr8:39777792-39779587 (-)
AKR/J	ENSMUSG00220005845	pseudogene	Chr8:39585817-39587612 (-)
BALB/cJ	ENSMUSG00180003343	pseudogene	Chr8:39317211-39319006 (-)
C3H/HeJ	ENSMUSG00175014922	pseudogene	Chr8:39441548-39443343 (-)
C57BL/6NJ	ENSMUSG00215009142	pseudogene	Chr8:39255706-39257501 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005005857	pseudogene	Chr8:39319375-39321170 (-)
CBA/J	ENSMUSG00210012798	pseudogene	Chr8:39337634-39339429 (-)
DBA/2J	ENSMUSG00185006234	pseudogene	Chr8:45191042-45192837 (-)
FVB/NJ	ENSMUSG00205002330	pseudogene	Chr8:38479540-38481335 (-)
JF1/MsJ	ENSUMUG00000014807	pseudogene	Chr8:46889266-46890496 (-)
LP/J	ENSMUSG00230009881	pseudogene	Chr8:48884486-48886281 (-)
NOD/ShiLtJ	ENSMUSG00190016011	pseudogene	Chr8:39363413-39365208 (-)
NZO/HlLtJ	ENSMUSG00225011935	pseudogene	Chr8:52486815-52488611 (-)
PWK/PhJ	ENSLUMG00010013484	pseudogene	Chr8:39135247-39136478 (-)
SPRET/EiJ	ENSMSPG00010004600	pseudogene	Chr8:40015816-40017600 (-)
WSB/EiJ	ENSIUOG00005005927	pseudogene	Chr8:40185897-40187692 (-)

Homology

• Gene Tree
  Gm6011
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm6011
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000110224 (Evidence)
• NCBI Gene
  547011

Representative Sequences			Length	Strain/Species
genomic	547011	NCBI Gene Model | MGI Sequence Detail	1793	C57BL/6J

References

• Summaries
  All 6

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;