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Gm6543 Pseudogene Detail
Summary
  • Symbol
    Gm6543
  • Name
    predicted gene 6543
Location &
Maps
more
  • Sequence Map
    Chr5:21803738-21804545 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, 9.95 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    194 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3644322
 pseudogene Chr5:21803737-21804620 (+)
129S1/SvImJ ENSMUSG00200011604
 pseudogene Chr5:17435529-17436336 (+)
A/J ENSMUSG00195041259
 pseudogene Chr5:16923740-16924538 (+)
AKR/J ENSMUSG00220040175
 pseudogene Chr5:16958360-16959158 (+)
BALB/cJ ENSMUSG00180025672
 pseudogene Chr5:16769931-16770738 (+)
C3H/HeJ ENSMUSG00175027467
 pseudogene Chr5:18731958-18732756 (+)
C57BL/6NJ ENSMUSG00215023520
 pseudogene Chr5:17337444-17338251 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0012567
 pseudogene ChrX:29898823-29899540 (+)
CAST/EiJ ENSTCUG00005003452
 pseudogene Chr5:16999202-17000014 (+)
CBA/J ENSMUSG00210005788
 pseudogene Chr5:17766147-17766945 (+)
DBA/2J ENSMUSG00185017577
 pseudogene Chr5:19248019-19248817 (+)
FVB/NJ ENSMUSG00205035285
 pseudogene Chr5:16468821-16469628 (+)
JF1/MsJ ENSUMUG00000006724
 pseudogene Chr5:23843410-23844219 (+)
LP/J ENSMUSG00230026673
 pseudogene Chr5:23717856-23718663 (+)
NOD/ShiLtJ ENSMUSG00190005289
 pseudogene Chr5:16776172-16776970 (+)
NZO/HlLtJ ENSMUSG00225009849
 pseudogene Chr5:29111298-29112105 (+)
PWK/PhJ ENSLUMG00010036206
 pseudogene Chr5:16878903-16879707 (+)
SPRET/EiJ ENSMSPG00010030377
 pseudogene Chr5:17773112-17773924 (+)
WSB/EiJ ENSIUOG00005032110
 pseudogene Chr5:19586402-19587209 (+)



Homology
less
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    10 phenotype references
  • All Mutations and Alleles
    5
  • Chemically induced (other)
    2
  • Radiation induced
    1
  • Spontaneous
    1
  • Targeted
    1
  • Genomic Mutations
    5 involving Gm6543
  • Find Mice (IMSR)
    0 strains or lines available
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
Sequences &
Gene Models
less
  • All Sequences
    22
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000106135 Ensembl Gene Model | MGI Sequence Detail 808 C57BL/6J ±  kb
transcript ENSMUST00000197353 Ensembl | MGI Sequence Detail 808 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 15
    Diseases 1
    Phenotypes 10
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:269071 Wong JC, et al., Functional evidence implicating chromosome 7q22 haploinsufficiency in myelodysplastic syndrome pathogenesis. Elife. 2015 Jul 20;4
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/01/2026
MGI 6.24 		The Jackson Laboratory