Gm5345 Pseudogene Detail

Summary

• Symbol
  Gm5345
• Name
  predicted gene 5345

• Feature Type
  pseudogene
• IDs
  MGI:3644320
  NCBI Gene: 384808
• Alliance
  genome feature page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr8:41306865-41308064 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, 23.89 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  128 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3644320	pseudogene	Chr8:41306662-41308082 (-)
129S1/SvImJ	ENSMUSG00200008043	pseudogene	Chr8:36363260-36364068 (-)
A/J	ENSMUSG00195006012	pseudogene	Chr8:36855400-36856208 (-)
AKR/J	ENSMUSG00220006458	pseudogene	Chr8:36660337-36661145 (-)
BALB/cJ	ENSMUSG00180003411	pseudogene	Chr8:36400179-36400987 (-)
C3H/HeJ	ENSMUSG00175014904	pseudogene	Chr8:36578169-36578977 (-)
C57BL/6NJ	ENSMUSG00215009984	pseudogene	Chr8:36379207-36380406 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012314	pseudogene	Chr8:34830703-34831914 (-)
CAST/EiJ	ENSTCUG00005005569	pseudogene	Chr8:36497455-36498693 (-)
CBA/J	ENSMUSG00210012809	pseudogene	Chr8:36418370-36419178 (-)
DBA/2J	ENSMUSG00185006223	pseudogene	Chr8:42318884-42319692 (-)
FVB/NJ	ENSMUSG00205002361	pseudogene	Chr8:35573550-35574358 (-)
JF1/MsJ	ENSUMUG00000015252	pseudogene	Chr8:44040038-44041237 (-)
LP/J	ENSMUSG00230009739	pseudogene	Chr8:45968669-45969477 (-)
NOD/ShiLtJ	ENSMUSG00190016311	pseudogene	Chr8:36439171-36439979 (-)
NZO/HlLtJ	ENSMUSG00225015095	pseudogene	Chr8:49612060-49612868 (-)
PWK/PhJ	ENSLUMG00010012936	pseudogene	Chr8:36272622-36273822 (-)
SPRET/EiJ	ENSMSPG00010004519	pseudogene	Chr8:37120845-37122036 (-)
WSB/EiJ	ENSIUOG00005005859	pseudogene	Chr8:37319005-37320205 (-)

Homology

• Gene Tree
  Gm5345
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000098050 (Evidence)
• NCBI Gene
  384808

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000098050	Ensembl Gene Model | MGI Sequence Detail	1200	C57BL/6J
transcript	ENSMUST00000183076	Ensembl | MGI Sequence Detail	1014	Not Applicable

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for Gm5345:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr81065	Chr8:41308590-41308594 (-)	-528 bp
Tssr81064	Chr8:41308132-41308139 (-)	-72 bp