Gm6375 Pseudogene Detail

Summary

• Symbol
  Gm6375
• Name
  predicted gene 6375

• Feature Type
  pseudogene
• IDs
  MGI:3644303
  NCBI Gene: 622962
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr6:133738408-133740025 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, 64.03 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  183 from dbSNP Build 142
• Strain Annotations
  14

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3644303	pseudogene	Chr6:133738400-133740041 (-)
129S1/SvImJ	ENSMUSG00200048222	pseudogene	Chr6:131243467-131245038 (-)
A/J	ENSMUSG00195033502	pseudogene	Chr6:130104181-130105798 (-)
AKR/J	ENSMUSG00220043115	pseudogene	Chr6:128182890-128184507 (-)
BALB/cJ	ENSMUSG00180038857	pseudogene	Chr6:130171879-130173496 (-)
C3H/HeJ	ENSMUSG00175040764	pseudogene	Chr6:130124587-130126204 (-)
C57BL/6NJ	ENSMUSG00215031708	pseudogene	Chr6:130361752-130363369 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005042139	pseudogene	Chr6:131032916-131034026 (-)
CBA/J	ENSMUSG00210016893	pseudogene	Chr6:130143171-130144788 (-)
DBA/2J	ENSMUSG00185046150	pseudogene	Chr6:130839342-130840959 (-)
FVB/NJ	no annotation
JF1/MsJ	ENSUMUG00000043684	pseudogene	Chr6:129580102-129581719 (-)
LP/J	ENSMUSG00230010118	pseudogene	Chr6:132038021-132039638 (-)
NOD/ShiLtJ	ENSMUSG00190040881	pseudogene	Chr6:130698598-130700215 (-)
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005047089	pseudogene	Chr6:130941775-130943301 (-)

Homology

• Gene Tree
  Gm6375
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  18
• RefSeq
  1

• Ensembl
  ENSMUSG00000107950 (Evidence)
• NCBI Gene
  622962

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000107950	Ensembl Gene Model | MGI Sequence Detail	1618	C57BL/6J
transcript	ENSMUST00000205201	Ensembl | MGI Sequence Detail	1145	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;