Gm5687 Pseudogene Detail

Summary

• Symbol
  Gm5687
• Name
  predicted gene 5687

• Feature Type
  pseudogene
• IDs
  MGI:3644274
  NCBI Gene: 435556
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr18:13031484-13032123 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, 6.84 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  111 from dbSNP Build 142
• Strain Annotations
  13

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3644274	pseudogene	Chr18:13031454-13032162 (+)
129S1/SvImJ	no annotation
A/J	ENSMUSG00195002371	pseudogene	Chr18:10160552-10161191 (+)
AKR/J	ENSMUSG00220012077	pseudogene	Chr18:10155033-10155672 (+)
BALB/cJ	ENSMUSG00180004193	pseudogene	Chr18:10609604-10610243 (+)
C3H/HeJ	ENSMUSG00175004532	pseudogene	Chr18:10148896-10149535 (+)
C57BL/6NJ	ENSMUSG00215025979	pseudogene	Chr18:9871009-9871648 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005017654	pseudogene	Chr18:9942897-9943536 (+)
CBA/J	ENSMUSG00210020658	pseudogene	Chr18:10157712-10158351 (+)
DBA/2J	ENSMUSG00185008375	pseudogene	Chr18:10165982-10166621 (+)
FVB/NJ	ENSMUSG00205037551	pseudogene	Chr18:9930258-9930897 (+)
JF1/MsJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190010353	pseudogene	Chr18:9930431-9931070 (+)
NZO/HlLtJ	ENSMUSG00225028136	pseudogene	Chr18:12147773-12148412 (+)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005028058	pseudogene	Chr18:10048956-10049595 (+)

Homology

• Gene Tree
  Gm5687
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  17
• RefSeq
  1

• Ensembl
  ENSMUSG00000080866 (Evidence)
• NCBI Gene
  435556

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000080866	Ensembl Gene Model | MGI Sequence Detail	640	C57BL/6J
transcript	ENSMUST00000118252	Ensembl | MGI Sequence Detail	640	Not Applicable

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;