Gm6632 Pseudogene Detail

Summary

• Symbol
  Gm6632
• Name
  predicted pseudogene 6632

• Feature Type
  pseudogene
• IDs
  MGI:3644251
  NCBI Gene: 625870
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr5:59210942-59211895 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, 31.65 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  162 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3644251	pseudogene	Chr5:59210942-59211922 (+)
129S1/SvImJ	ENSMUSG00200000099	pseudogene	Chr5:54802941-54803894 (+)
A/J	ENSMUSG00195000323	pseudogene	Chr5:54152654-54153607 (+)
AKR/J	ENSMUSG00220007119	pseudogene	Chr5:54218929-54219882 (+)
BALB/cJ	ENSMUSG00180006106	pseudogene	Chr5:53921973-53922926 (+)
C3H/HeJ	ENSMUSG00175001780	pseudogene	Chr5:55935626-55936579 (+)
C57BL/6NJ	ENSMUSG00215002777	pseudogene	Chr5:54718702-54719655 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011612	pseudogene	Chr5:52873962-52874915 (+)
CAST/EiJ	ENSTCUG00005000635	pseudogene	Chr5:53978201-53979154 (+)
CBA/J	ENSMUSG00210000344	pseudogene	Chr5:54885715-54886668 (+)
DBA/2J	ENSMUSG00185000096	pseudogene	Chr5:56750308-56751261 (+)
FVB/NJ	ENSMUSG00205011396	pseudogene	Chr5:53760480-53761433 (+)
JF1/MsJ	ENSUMUG00000020764	pseudogene	Chr5:61302218-61303171 (+)
LP/J	ENSMUSG00230009112	pseudogene	Chr5:61438848-61439801 (+)
NOD/ShiLtJ	ENSMUSG00190000415	pseudogene	Chr5:53847655-53848608 (+)
NZO/HlLtJ	ENSMUSG00225002598	pseudogene	Chr5:66560683-66561636 (+)
PWK/PhJ	ENSLUMG00010004488	pseudogene	Chr5:53905373-53906326 (+)
SPRET/EiJ	ENSMSPG00010004054	pseudogene	Chr5:55574448-55575401 (+)
WSB/EiJ	ENSIUOG00005000081	pseudogene	Chr5:56777941-56778894 (+)

Homology

• Gene Tree
  Gm6632
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  2
• Spontaneous
  1
• Genomic Mutations
  3 involving Gm6632
• Find Mice (IMSR)
  2 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000094696 (Evidence)
• NCBI Gene
  625870

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000094696	Ensembl Gene Model | MGI Sequence Detail	954	C57BL/6J
transcript	ENSMUST00000168425	Ensembl | MGI Sequence Detail	954	Not Applicable

References

• Summaries
  All 9

  Phenotypes 4
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17