Gm8991 Pseudogene Detail

Summary

• Symbol
  Gm8991
• Name
  predicted pseudogene 8991

• Feature Type
  pseudogene
• IDs
  MGI:3644227
  NCBI Gene: 108169028
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr5:16934994-16936068 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, 7.26 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  113 from dbSNP Build 142
• Strain Annotations
  15

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3644227	pseudogene	Chr5:16934613-16936104 (-)
129S1/SvImJ	ENSMUSG00200011929	pseudogene	Chr5:12577054-12578128 (-)
A/J	ENSMUSG00195041675	pseudogene	Chr5:12034649-12035723 (-)
AKR/J	ENSMUSG00220038411	pseudogene	Chr5:12007166-12008248 (-)
BALB/cJ	ENSMUSG00180027333	pseudogene	Chr5:11891821-11892895 (-)
C3H/HeJ	ENSMUSG00175028342	pseudogene	Chr5:13843800-13844874 (-)
C57BL/6NJ	ENSMUSG00215023706	pseudogene	Chr5:12454579-12455653 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005003490	pseudogene	Chr5:12222586-12223666 (-)
CBA/J	ENSMUSG00210005188	pseudogene	Chr5:12883173-12884247 (-)
DBA/2J	ENSMUSG00185017595	pseudogene	Chr5:14378762-14379844 (-)
FVB/NJ	ENSMUSG00205031470	pseudogene	Chr5:11614425-11615499 (-)
JF1/MsJ	no annotation
LP/J	ENSMUSG00230003328	pseudogene	Chr5:18898013-18899087 (-)
NOD/ShiLtJ	ENSMUSG00190004947	pseudogene	Chr5:11914985-11916059 (-)
NZO/HlLtJ	ENSMUSG00225009839	pseudogene	Chr5:24260548-24261622 (-)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005032529	pseudogene	Chr5:14734073-14735155 (-)

Homology

• Gene Tree
  Gm8991
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  2
• Spontaneous
  1
• Genomic Mutations
  3 involving Gm8991
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19
• RefSeq
  1

• Ensembl
  ENSMUSG00000059179 (Evidence)
• NCBI Gene
  108169028

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000059179	Ensembl Gene Model | MGI Sequence Detail	1075	C57BL/6J
transcript	ENSMUST00000073014	Ensembl | MGI Sequence Detail	1075	Not Applicable

References

• Summaries
  All 9

  Phenotypes 4
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17