Gm9050 Pseudogene Detail

Summary

• Symbol
  Gm9050
• Name
  predicted gene 9050

• Feature Type
  pseudogene
• IDs
  MGI:3644215
  NCBI Gene: 668217
• Alliance
  gene page

Location &
Maps

• Sequence Map
  ChrX:102271311-102271758 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 46.00 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  8 from dbSNP Build 142
• Strain Annotations
  12

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3644215	pseudogene	ChrX:102271264-102271768 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0011206	pseudogene	Chr15:82458295-82460497 (+)
A/J	MGP_AJ_G0014685	pseudogene	ChrX:99786356-99786803 (+)
AKR/J	MGP_AKRJ_G0011155	pseudogene	Chr15:81743747-81744943 (+)
BALB/cJ	MGP_BALBcJ_G0014632	pseudogene	ChrX:98587985-98588437 (+)
C3H/HeJ	no annotation
C57BL/6NJ	MGP_C57BL6NJ_G0015118	pseudogene	ChrX:102808348-102809659 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010042	pseudogene	Chr15:75984881-75985333 (+)
CAST/EiJ	MGP_CASTEiJ_G0014091	pseudogene	ChrX:84585451-84585898 (+)
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	MGP_FVBNJ_G0014521	pseudogene	ChrX:98351769-98352301 (+)
LP/J	MGP_LPJ_G0014635	pseudogene	ChrX:100864248-100864737 (+)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	MGP_NZOHlLtJ_G0011439	pseudogene	Chr15:81843024-81843479 (+)
PWK/PhJ	no annotation
SPRET/EiJ	MGP_SPRETEiJ_G0013692	pseudogene	ChrX:85274090-85274538 (+)
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm9050
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  15

• Ensembl
  ENSMUSG00000083763 (Evidence)
• NCBI Gene
  668217

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000083763	Ensembl Gene Model | MGI Sequence Detail	448	C57BL/6J
transcript	ENSMUST00000119501	Ensembl | MGI Sequence Detail	448	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;