Gm6921 Pseudogene Detail

Summary

• Symbol
  Gm6921
• Name
  predicted pseudogene 6921

• Feature Type
  pseudogene
• IDs
  MGI:3644183
  NCBI Gene: 628847
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr8:128287916-128288350 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, 74.69 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  70 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3644183	pseudogene	Chr8:128287916-128288350 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0014112	pseudogene	Chr8:131469476-131469910 (+)
A/J	MGP_AJ_G0014137	pseudogene	Chr8:126011256-126011690 (+)
AKR/J	MGP_AKRJ_G0014059	pseudogene	Chr8:129634673-129635107 (+)
BALB/cJ	MGP_BALBcJ_G0014087	pseudogene	Chr8:126180547-126180981 (+)
C3H/HeJ	MGP_C3HHeJ_G0013918	pseudogene	Chr8:130281614-130282048 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0014527	pseudogene	Chr8:135762966-135763400 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0013573	pseudogene	Chr8:130466983-130467417 (+)
CBA/J	MGP_CBAJ_G0013901	pseudogene	Chr8:140826871-140827305 (+)
DBA/2J	MGP_DBA2J_G0013980	pseudogene	Chr8:125102673-125103107 (+)
FVB/NJ	MGP_FVBNJ_G0013981	pseudogene	Chr8:124343642-124344076 (+)
LP/J	MGP_LPJ_G0014061	pseudogene	Chr8:131630260-131630694 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0014009	pseudogene	Chr8:142730286-142730720 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0014501	pseudogene	Chr8:129865036-129865470 (+)
PWK/PhJ	MGP_PWKPhJ_G0013385	pseudogene	Chr8:124927275-124927709 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0013169	pseudogene	Chr8:128523594-128524025 (+)
WSB/EiJ	MGP_WSBEiJ_G0013630	pseudogene	Chr8:130621481-130621915 (+)

Homology

• Gene Tree
  Gm6921
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000090074 (Evidence)
• NCBI Gene
  628847

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000090074	Ensembl Gene Model | MGI Sequence Detail	435	C57BL/6J
transcript	ENSMUST00000161478	Ensembl | MGI Sequence Detail	435	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;