Gm9176 Pseudogene Detail

Summary

• Symbol
  Gm9176
• Name
  predicted gene 9176

• Feature Type
  pseudogene
• IDs
  MGI:3644170
  NCBI Gene: 668453
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr10:128385563-128386682 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, 77.05 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  75 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3644170	pseudogene	Chr10:128385411-128386792 (-)
129S1/SvImJ	ENSMUSG00200013666	pseudogene	Chr10:124743675-124744794 (-)
A/J	ENSMUSG00195017418	pseudogene	Chr10:125206954-125208073 (-)
AKR/J	ENSMUSG00220006836	pseudogene	Chr10:124812080-124813199 (-)
BALB/cJ	ENSMUSG00180011828	pseudogene	Chr10:125197917-125199036 (-)
C3H/HeJ	ENSMUSG00175006247	pseudogene	Chr10:125197307-125198426 (-)
C57BL/6NJ	ENSMUSG00215019177	pseudogene	Chr10:124804013-124805132 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005041625	pseudogene	Chr10:124188917-124190036 (-)
CBA/J	ENSMUSG00210009469	pseudogene	Chr10:125021527-125022646 (-)
DBA/2J	ENSMUSG00185027497	pseudogene	Chr10:125171161-125172280 (-)
FVB/NJ	ENSMUSG00205024598	pseudogene	Chr10:124412514-124413633 (-)
JF1/MsJ	ENSUMUG00000044774	pseudogene	Chr10:126480624-126481743 (-)
LP/J	ENSMUSG00230034153	pseudogene	Chr10:127096651-127097770 (-)
NOD/ShiLtJ	ENSMUSG00190016543	pseudogene	Chr10:125234783-125235902 (-)
NZO/HlLtJ	ENSMUSG00225037784	pseudogene	Chr10:131295724-131296843 (-)
PWK/PhJ	ENSLUMG00010010642	pseudogene	Chr10:124932804-124933923 (-)
SPRET/EiJ	ENSMSPG00010037677	pseudogene	Chr10:126897219-126897225 (-)
WSB/EiJ	ENSIUOG00005008914	pseudogene	Chr10:124812889-124814008 (-)

Homology

• Gene Tree
  Gm9176
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000112850 (Evidence)
• NCBI Gene
  668453

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000112850	Ensembl Gene Model | MGI Sequence Detail	1120	C57BL/6J
transcript	ENSMUST00000219955	Ensembl | MGI Sequence Detail	1120	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm9176:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr99892	Chr10:128387625-128387628 (-)	-945 bp