Gm8748 Pseudogene Detail

Summary

• Symbol
  Gm8748
• Name
  predicted gene 8748

• Feature Type
  pseudogene
• IDs
  MGI:3644122
  NCBI Gene: 667656
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr8:104797781-104798364 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, 53.04 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  137 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3644122	pseudogene	Chr8:104797781-104798367 (+)
129S1/SvImJ	ENSMUSG00200015535	pseudogene	Chr8:99095903-99096489 (+)
A/J	ENSMUSG00195004083	pseudogene	Chr8:99379309-99379895 (+)
AKR/J	ENSMUSG00220012145	pseudogene	Chr8:99546652-99547238 (+)
BALB/cJ	ENSMUSG00180004072	pseudogene	Chr8:99404762-99405348 (+)
C3H/HeJ	ENSMUSG00175002880	pseudogene	Chr8:99461555-99462141 (+)
C57BL/6NJ	ENSMUSG00215001329	pseudogene	Chr8:99075864-99076450 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005023543	pseudogene	Chr8:98850153-98850739 (+)
CBA/J	ENSMUSG00210015538	pseudogene	Chr8:99390162-99390748 (+)
DBA/2J	ENSMUSG00185005956	pseudogene	Chr8:105498058-105498644 (+)
FVB/NJ	ENSMUSG00205017729	pseudogene	Chr8:98422887-98423473 (+)
JF1/MsJ	ENSUMUG00000017309	pseudogene	Chr8:107831230-107831816 (+)
LP/J	ENSMUSG00230008546	pseudogene	Chr8:109178594-109179180 (+)
NOD/ShiLtJ	ENSMUSG00190013748	pseudogene	Chr8:99528191-99528777 (+)
NZO/HlLtJ	ENSMUSG00225023099	pseudogene	Chr8:112527578-112528164 (+)
PWK/PhJ	ENSLUMG00010004053	pseudogene	Chr8:99346563-99347149 (+)
SPRET/EiJ	ENSMSPG00010006443	pseudogene	Chr8:101458837-101459423 (+)
WSB/EiJ	ENSIUOG00005006208	pseudogene	Chr8:100206517-100207103 (+)

Homology

• Gene Tree
  Gm8748
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000110019 (Evidence)
• NCBI Gene
  667656

Representative Sequences			Length	Strain/Species
genomic	667656	NCBI Gene Model | MGI Sequence Detail	584	C57BL/6J

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;